EBG00000313325 - n.746G>A
Drug resistance types
39 Sensitive
14 RR-TB
8 HR-TB
26 MDR-TB
18 Pre-XDR-TB
0 XDR-TB
38 Other
lineage Counts
| lineage | Count |
|---|---|
| 4 | |
| lineage4.1.2 | 2 |
| lineage4.6 | 3 |
| lineage4.3.2.1 | 4 |
| lineage4.3.3 | 5 |
| lineage4.1.1 | 1 |
| lineage1.1.3.1 | 2 |
| lineage4 | 2 |
| lineage2.2.1 | 18 |
| lineage2.2.2 | 7 |
| lineage4.3.4.1 | 1 |
| lineage4.8 | 4 |
| lineage4.2.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.1.2.1 | 8 |
| lineage4.1.4 | 1 |
| lineage3 | 8 |
| La1.7.1 | 2 |
| lineage4.9 | 20 |
| lineage6 | 2 |
| lineage4.3.2 | 3 |
| lineage1.1.3.3 | 1 |
| lineage4.3.4.2.1 | 5 |
| lineage6.1.3 | 1 |
| lineage1.1.1.1 | 3 |
| lineage3.1.1 | 2 |
| lineage1.2.2.1 | 4 |
| lineage2.2.1.1 | 4 |
| lineage4.2.2.2 | 3 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| La1.6 | 2 |
| lineage4.4.1.1.1 | 1 |
| lineage4.6.1.1 | 3 |
| lineage4.4.2 | 2 |
| La2 | 1 |
| La1.8.1 | 2 |
| lineage1.2.1.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.1.3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.7 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4;lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 143 |
Geographic prevalence
Country level data for this variant is available for 9 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR323041 | HR-TB | None | SRR7131114 | Other | lineage4.1.2 | None | SRR8649119 | Other | lineage4.6 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR7755767 | Sensitive | lineage4.3.3 | None | SRR6982371 | Sensitive | lineage4.1.1 | None | SRR7131132 | Other | lineage1.1.3.1 | None | SRR7131156 | Other | lineage4.6 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR1063855 | Other | lineage4 | None | ERR027451 | Pre-XDR-TB | lineage2.2.1 | ru | DRR184629 | Other | lineage2.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | ERR1034765 | HR-TB | lineage4.3.3 | None | ERR3324331 | MDR-TB | lineage4.3.4.1 | None | ERR1144989 | Sensitive | lineage4.8 | None | ERR3324328 | MDR-TB | lineage2.2.1 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR3324355 | HR-TB | lineage4.1.1.3 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR3470682 | Other | lineage3 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR4450956 | Other | La1.7.1 | None | ERR3797035 | Other | lineage4.9 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR3470691 | MDR-TB | lineage3 | None | ERR3804115 | Sensitive | lineage6 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR473279 | Other | lineage4.9 | None | ERR6197022 | Other | lineage4.9 | None | ERR5987396 | MDR-TB | lineage4.3.2 | None | ERR4769505 | Other | lineage4.9 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR9787173 | Sensitive | lineage6 | None | ERR9117711 | Other | lineage4.3.4.2.1 | None | ERR9120074 | MDR-TB | lineage4.3.2 | None | ERR9787079 | Other | lineage6.1.3 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | ERR9786008 | Sensitive | lineage1.1.1.1 | None | SRR1013561 | Pre-XDR-TB | lineage2.2.2 | None | SRR1011492 | Sensitive | lineage1.2.2.1 | None | SRR1011489 | Sensitive | lineage2.2.1.1 | None | SRR1013562 | Pre-XDR-TB | lineage2.2.2 | None | SRR10315640 | MDR-TB | lineage4.8 | None | SRR1019130 | Sensitive | lineage4.3.2.1 | None | SRR1048862 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049030 | Pre-XDR-TB | lineage4.9 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049031 | HR-TB | lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049569 | Sensitive | lineage4.2.2.2 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049568 | Sensitive | lineage4.2.2.2 | None | SRR1049672 | Other | lineage3 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062861 | Sensitive | lineage4.1.2 | None | SRR1062860 | Sensitive | lineage2.2.1.1 | None | SRR1062863 | Sensitive | lineage1.2.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR10993936 | Other | La1.6 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1140736 | RR-TB | None | SRR1173281 | RR-TB | lineage3 | None | SRR1169242 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173182 | Other | lineage4.6.1.1 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR1173740 | Other | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR11972159 | MDR-TB | lineage2.2.1 | None | SRR11972311 | Pre-XDR-TB | None | SRR1173770 | Other | lineage4.9 | None | SRR11972165 | MDR-TB | lineage2.2.1.1 | None | SRR11972190 | MDR-TB | lineage2.2.1 | None | SRR13423578 | Other | lineage2.2.1 | None | SRR13423579 | RR-TB | lineage2.2.1 | None | SRR13423641 | MDR-TB | lineage2.2.1 | None | SRR16115074 | Sensitive | lineage4.4.2 | None | SRR13888750 | Other | La2 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR15723110 | Sensitive | lineage2.2.1 | None | SRR1791899 | HR-TB | La1.8.1 | None | SRR16627757 | Sensitive | lineage3 | None | SRR18149430 | Sensitive | lineage4.1.1.3 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR21714038 | Sensitive | lineage4.3.3 | None | SRR18149455 | Sensitive | lineage4.1.2.1 | None | SRR18911000 | Sensitive | lineage2.2.1 | None | SRR18391760 | Other | La1.7.1 | None | SRR18911564 | Sensitive | lineage4.4.2 | None | SRR21727888 | Other | lineage1.2.1.2 | None | SRR305201 | Sensitive | lineage4.9 | None | ERR5758391 | Pre-XDR-TB | lineage2.2.2 | None | SRR23174454 | Other | La1.8.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR1199071 | HR-TB | lineage4.6.1.1 | ug | ERR212096 | Sensitive | lineage1.2.2.1 | mw | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR2510807 | Other | lineage4.6 | None | ERR4818904 | Other | lineage4.8 | None | SAMN02350450 | Sensitive | lineage1.2.2.1 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | SRR3675566 | Sensitive | lineage4.1.2.1 | None | ERR216901 | Other | lineage3.1.1 | None | SAMN02380985 | Sensitive | lineage4.2.2.2 | None | ERR2512704 | Other | lineage4.3.2 | gb | SAMN02350447 | Sensitive | lineage2.2.1.1 | None | SRR5074294 | Sensitive | lineage4.4.1.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | SAMN02360560 | Pre-XDR-TB | lineage2.2.2 | kr | ERR1873510 | Pre-XDR-TB | lineage2.2.2 | za | ERR4820030 | Other | lineage4.9 | None | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | SRR6046790 | Other | lineage4.7 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | SRR6045264 | Sensitive | lineage2.2.1 | None | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045989 | Other | lineage2.2.1 | gb | SRR6397640 | Other | lineage4.2.1.1 | None | SRR6153149 | Sensitive | lineage1.1.1.1 | ca | SRR6650411 | Sensitive | lineage1.1.3.1 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SAMN02567682 | Other | lineage4.6.1.1 | ug |
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