Rv1630 - c.564C>T
Drug resistance types
43 Sensitive
27 RR-TB
38 HR-TB
7 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
44 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.4 | 1 |
| La1.7.1 | 1 |
| lineage4.4 | 1 |
| lineage3.1.3 | 1 |
| lineage2.2.1.1 | 3 |
| lineage4 | 22 |
| lineage4.9 | 53 |
| lineage4.8 | 12 |
| 20 | |
| lineage3 | 7 |
| lineage4.5 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage2.2.1 | 11 |
| lineage1.1.1 | 1 |
| lineage4.2.1 | 3 |
| lineage4.3.3 | 1 |
| La2 | 1 |
| La1.8.1 | 2 |
| lineage4.9.1 | 1 |
| lineage4.4.1.2 | 1 |
| La1.2 | 2 |
| lineage6.1.1 | 2 |
| lineage4.9;La1.3 | 2 |
| lineage3.1.2 | 1 |
| lineage2.2.2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.6.5 | 2 |
| lineage6 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 163 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR16278274 | Other | La1.4 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR4814639 | HR-TB | lineage4 | None | SRR20632814 | Sensitive | lineage4 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR22424787 | Sensitive | lineage4.9 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR4815310 | Other | None | SRR3675312 | HR-TB | lineage4 | None | ERR1750907 | RR-TB | None | ERR4814976 | Other | lineage4.9 | None | ERR4815550 | Other | lineage4 | None | ERR4816322 | Other | lineage4.9 | None | ERR176740 | HR-TB | None | SAMEA3501015 | Other | lineage4.8 | None | ERR4816470 | Other | lineage3 | None | ERR4817069 | RR-TB | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816466 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4816852 | Other | lineage4.9 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2228890 | Other | lineage4 | None | ERR4815816 | Other | lineage4.5 | gb | ERR4817667 | HR-TB | lineage4.8 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR4818929 | HR-TB | None | ERR4818110 | Sensitive | lineage4.9 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4819051 | Other | lineage4 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4819546 | HR-TB | lineage3 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4819314 | Other | lineage1.1.1 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR5341470 | HR-TB | None | SRR6046141 | Other | lineage4.9 | None | ERR4821143 | RR-TB | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6046253 | HR-TB | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4828518 | HR-TB | lineage2.2.1 | None | SRR6046385 | Other | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | ERR4831117 | HR-TB | None | SRR6832644 | Other | lineage4.3.3 | None | SRR6982246 | Sensitive | lineage4 | None | ERR294266 | HR-TB | None | SRR7645906 | Other | lineage2.2.1 | None | ERR502524 | HR-TB | La2 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7645971 | Other | lineage2.2.1 | None | DRR188494 | Sensitive | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR323039 | HR-TB | None | ERR323053 | HR-TB | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | ERR017781 | Other | lineage3 | None | ERR037504 | Other | lineage4.9.1 | None | ERR019855 | Other | lineage3 | None | ERR067712 | HR-TB | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR1063857 | HR-TB | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR349296 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR4769418 | Other | La1.2 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769427 | Other | La1.2 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769502 | RR-TB | lineage4.9;La1.3 | None | ERR4769521 | HR-TB | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798504 | Other | lineage3 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4811493 | HR-TB | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR736865 | HR-TB | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR11462861 | Other | La1.8.1 | None | ERR9787336 | Other | lineage6 | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173740 | Other | None | SRR1174897 | HR-TB | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181368 | Other | lineage4.9 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR16156188 | HR-TB | lineage4.9 | None |
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