EBG00000313339 - n.1851A>T
Drug resistance types
13 Sensitive
9 RR-TB
8 HR-TB
24 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
31 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.9 | 25 |
| lineage4.6.1.2 | 5 |
| lineage3 | 7 |
| lineage2.2.1 | 12 |
| 1 | |
| lineage4 | 7 |
| La2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage2.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.8 | 3 |
| lineage1.2.1.1 | 1 |
| lineage4.4.1 | 1 |
| lineage4.1.2.1 | 6 |
| lineage4.1.1.3 | 2 |
| lineage4.2.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage1.1.3.3 | 1 |
| lineage3.1.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.3.4.1 | 1 |
| La1.2 | 1 |
| lineage5.1.1 | 1 |
| lineage4.3 | 1 |
| lineage2.2.2 | 1 |
| lineage4.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 92 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1173740 | Other | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1180252 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR16057996 | Sensitive | lineage3 | None | SRR13888750 | Other | La2 | None | SRR16157123 | Other | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR1949992 | Other | lineage4.8 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2229197 | Sensitive | lineage4 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR1750938 | Other | lineage4.4.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4816782 | Other | lineage4.1.2.1 | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR6045485 | Other | lineage4.9 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4820484 | Other | lineage4.8 | None | ERR4819910 | Other | lineage4.9 | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6044817 | Other | lineage3 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR11465830 | Sensitive | lineage4.9 | None | SRR6046020 | Other | lineage3 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR6982246 | Sensitive | lineage4 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR11465579 | Sensitive | lineage4.3.4.1 | None | ERR036207 | Other | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR11465490 | Sensitive | lineage4.1.2.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR11465627 | Sensitive | lineage4.3.4.2.1 | None | ERR4195337 | Sensitive | lineage4.1.2.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4772212 | Other | La1.2 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR751345 | Other | lineage5.1.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117788 | Other | lineage3 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9125746 | Sensitive | lineage3 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR023428 | Sensitive | lineage4 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None |
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