Rv0701 - c.-142_-140delTCGinsAGC
Drug resistance types
6 Sensitive
23 RR-TB
2 HR-TB
17 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
5 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 23 |
| lineage4.8 | 3 |
| lineage5.1.1 | 1 |
| lineage2.2.1 | 5 |
| La1.8.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4 | 4 |
| 4 | |
| lineage4.6.5 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.6.1.2 | 5 |
| lineage4.1.2.1 | 1 |
| lineage3 | 2 |
| lineage4.4 | 1 |
| lineage3.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.3.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 58 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR502479 | RR-TB | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4796577 | MDR-TB | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1140736 | RR-TB | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1180440 | Other | lineage4.9 | None | SRR1173740 | Other | None | SRR20632814 | Sensitive | lineage4 | None | SRR1180446 | Other | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4816470 | Other | lineage3 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816729 | Sensitive | lineage4.9 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR2229659 | Sensitive | lineage4.8 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR4821214 | RR-TB | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SRR6044952 | RR-TB | lineage4.9 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None |
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