lineage | Count |
---|---|
lineage4.6.2.2 | 1 |
lineage4.3.4.2 | 2 |
lineage1.1.2 | 2 |
lineage4.8 | 3 |
lineage4.1.3 | 1 |
lineage3 | 7 |
lineage4.3.3 | 2 |
lineage2.2.1 | 6 |
lineage4.9 | 14 |
lineage6.3.1 | 1 |
lineage4.1.2.1 | 5 |
lineage1.2.2.2 | 2 |
lineage1.1.3.1 | 1 |
lineage3.1.2 | 1 |
lineage4.1.1.3.1 | 1 |
3 | |
lineage4.6.1.1 | 2 |
lineage4.3.2.1 | 2 |
lineage2.2.2 | 1 |
La1.2 | 1 |
lineage1.1.3.3 | 1 |
lineage1.1.1.1 | 1 |
lineage4.3.4.2.1 | 4 |
lineage4 | 1 |
lineage4.4.1.1;lineage4.1.2.1 | 1 |
La1.6 | 1 |
spoligotype | Count |
---|---|
None | 67 |
ID | Drug resistance | Lineage | Country iso2 | ERR4814399 | Other | lineage4.6.2.2 | gb | ERR4815966 | Other | lineage4.3.4.2 | gb | ERR4815680 | Other | lineage1.1.2 | gb | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR4816001 | Other | lineage3 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4816569 | Other | lineage4.3.3 | gb | ERR4818694 | RR-TB | lineage2.2.1 | gb | ERR4816729 | Sensitive | lineage4.9 | None | ERR4818431 | Other | lineage1.1.2 | gb | ERR4818904 | Other | lineage4.8 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR4817933 | Sensitive | lineage4.1.2.1 | gb | ERR4820375 | Sensitive | lineage1.2.2.2 | None | ERR2513657 | Other | lineage1.2.2.2 | gb | ERR4819383 | RR-TB | lineage4.9 | None | ERR2514137 | Pre-XDR-TB | lineage2.2.1 | None | ERR2513738 | Other | lineage1.1.3.1 | None | ERR4819636 | Other | lineage3.1.2 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4820503 | Other | lineage2.2.1 | None | ERR4820030 | Other | lineage4.9 | None | SRR6046481 | Other | lineage4.1.1.3.1 | None | ERR4821154 | Other | lineage2.2.1 | gb | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4822033 | Other | lineage3 | None | SRR6045379 | Other | None | ERR4821477 | Other | lineage4.8 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | DRR184932 | Other | lineage2.2.1 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR9971168 | Other | lineage4.3.2.1 | None | DRR184629 | Other | lineage2.2.1 | None | ERR10796575 | RR-TB | lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | ERR037235 | Sensitive | lineage4.9 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR4769478 | Other | La1.2 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | SRR10315462 | RR-TB | lineage4.3.2.1 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1140736 | RR-TB | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1173740 | Other | None | SRR1173834 | Other | lineage4.6.1.1 | None |
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