Rv0668 - c.93G>C
Drug resistance types
9 Sensitive
12 RR-TB
7 HR-TB
12 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
20 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 4 |
| La1.3 | 1 |
| lineage4.9 | 17 |
| lineage4.6.1.1 | 1 |
| lineage3;lineage4 | 1 |
| La1.4 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.7 | 1 |
| lineage4.8.1 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage4.6.5 | 2 |
| lineage4.2.2.2 | 2 |
| lineage4.4 | 1 |
| lineage4.6.1.2 | 2 |
| lineage4.8 | 6 |
| La1.7.X-unk4 | 1 |
| lineage4 | 1 |
| lineage2.2.1.1 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.1.2 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.4.2 | 1 |
| lineage1.2.1.2 | 1 |
| lineage3 | 3 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4.1.2.1 | 1 |
| lineage4.3.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 63 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR4769436 | Other | La1.3 | None | ERR4769493 | Other | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR1023509 | Other | lineage4.9 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR16278274 | Other | La1.4 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | SRR1181256 | Other | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR3445487 | Other | La1.7.X-unk4 | None | SRR1180446 | Other | lineage4.9 | None | ERR4821747 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4816322 | Other | lineage4.9 | None | SRR1181403 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR1173281 | Other | lineage3 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR1180440 | Other | lineage4.9 | None | SRR22424765 | HR-TB | lineage4.8 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR867567 | RR-TB | lineage3 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None |
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