EBG00000313339 - n.42A>G


Drug resistance types
112 Sensitive 13 RR-TB 76 HR-TB 26 MDR-TB 11 Pre-XDR-TB 0 XDR-TB 77 Other
lineage Counts
lineage Count
lineage4.9 90
lineage2.2.1 19
48
La2 1
lineage4.2.2.1 2
lineage4.1.2.1 5
lineage4.2.1 5
La1.8.1 3
lineage1.2.1.2.1 3
lineage3.1.3 2
lineage4 75
lineage4;lineage2.2 1
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage4.3.4 1
lineage2.2 4
lineage1.2.1.1 1
lineage2.1 2
lineage4.3.4.2.1 5
lineage4.1.3 2
lineage4.8 7
lineage4.3.4.2 1
lineage3 4
lineage4;lineage2 1
lineage1.1.2 4
lineage4.1.1.2 1
lineage4.3.3 1
lineage1.1.1 1
lineage4.9;lineage2.1 1
lineage4.1 1
lineage4.1.1.3 1
lineage4.1.2 2
lineage4.3.2.1 1
lineage4.7 1
lineage4.4.1.2 1
lineage4.6.1.1 2
lineage4;lineage3.1 1
La1.3 4
lineage4.9;La1.3 1
lineage4.6.1.2 1
lineage1.1.3.1 1
lineage2.2.1.1 1
lineage4.4.1.1;lineage4.1.2.1 1
La1.6 1
lineage4.4.1.1.1 2
lineage4.9;lineage2.2 1
lineage2 1
spoligotype Counts
spoligotype Count
None 315
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1184308 Sensitive lineage4.9 None
SRR1184329 MDR-TB lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
SRR1196545 HR-TB lineage4.9 None
SRR14801749 Sensitive None
SRR13888750 Other La2 None
SRR13180203 Sensitive lineage4.2.2.1 None
SRR13180363 Sensitive lineage4.1.2.1 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR1791747 Other La1.8.1 None
SRR16058013 HR-TB lineage1.2.1.2.1 None
SRR16149133 MDR-TB lineage4.2.2.1 None
SRR19295647 Sensitive lineage4.9 None
SRR18913742 Sensitive lineage3.1.3 None
SRR22424787 Sensitive lineage4.9 None
SRR20632814 Sensitive lineage4 None
SRR21677886 Sensitive lineage4.9 None
ERR4814639 HR-TB lineage4 None
SRR8692807 Other lineage4.9 None
SRR8692863 Other lineage4;lineage2.2 None
SRR8692832 Other lineage4.9 None
SRR8692887 Other None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
ERR161039 Sensitive lineage4.3.4 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR8692812 Other lineage4.9 None
SRR8692885 Other lineage4.9 None
SRR8692893 Other lineage4.9 None
SRR8692825 Other lineage4.9 None
SRR3601585 Pre-XDR-TB lineage2.2 None
ERR181744 HR-TB None
ERR4815489 Sensitive lineage4.9 None
ERR4815471 Other lineage4.9 None
ERR4814734 Other lineage1.2.1.1 None
ERR702405 Sensitive lineage2.1 None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR3675246 Sensitive lineage4 None
SRR5341422 HR-TB lineage2.1 None
ERR4816964 Other lineage4.9 None
ERR4816198 Sensitive lineage4.1.3 None
SRR2024953 MDR-TB lineage2.2.1 cn
SRR3675284 HR-TB lineage4.9 None
ERR4815036 Sensitive lineage4.8 None
ERR212033 HR-TB None
ERR212034 HR-TB None
SAMN02380982 MDR-TB lineage4.3.4.2 None
ERR4816470 Other lineage3 None
ERR2229198 MDR-TB lineage4.8 None
ERR4816762 Other lineage4;lineage2 None
SRR3675555 HR-TB None
ERR212123 Other None
ERR212138 HR-TB lineage4 None
SRR5341384 Sensitive lineage4.9 None
ERR4815815 Sensitive lineage4 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR4817667 HR-TB lineage4.8 None
ERR4818710 Sensitive lineage4.9 None
ERR4818832 Sensitive lineage1.1.2 gb
ERR4818110 Sensitive lineage4.9 None
ERR2513121 Sensitive lineage3.1.3 None
ERR245675 Sensitive lineage1.1.2 None
ERR4818252 Other lineage4.1.1.2 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4818561 HR-TB lineage4 None
ERR4819051 Other lineage4 None
ERR4818904 Other lineage4.8 None
SRR5341387 Other lineage4 None
SRR5341453 Sensitive None
ERR4818624 Other lineage4.3.4.2.1 None
SRR5341366 Sensitive lineage4 None
SRR5341373 HR-TB lineage4 None
SRR5153091 HR-TB lineage4.3.3 None
ERR4819314 Other lineage1.1.1 None
SRR5341396 Other lineage4 None
SRR5341408 Sensitive lineage3 None
SRR5341400 HR-TB lineage4 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR4819357 Other lineage4.9 None
ERR4819383 RR-TB lineage4.9 None
SRR5341432 HR-TB lineage4 None
SRR5341425 Other lineage4 None
ERR4819546 HR-TB lineage3 None
ERR1035138 MDR-TB None
SRR5341293 HR-TB lineage4 None
SRR5341455 Sensitive lineage4 None
SRR5341467 Other lineage4 None
SRR5341298 Sensitive lineage4 None
SRR5341299 Sensitive lineage4 None
SRR5341315 Sensitive None
SRR5341310 Other lineage1.1.2 None
SRR5341323 Sensitive lineage4 None
SRR5341330 HR-TB None
SRR5341300 Other lineage4 None
SRR5341303 RR-TB lineage4 None
SRR5341308 Sensitive lineage4 None
ERR4819933 Other lineage4.9 None
SRR5341313 HR-TB None
ERR4820030 Other lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341461 Sensitive lineage4 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
ERR4821787 Sensitive lineage4.9 None
SRR5341469 Other lineage4 None
ERR4821811 RR-TB lineage4.9 None
ERR502511 Sensitive lineage4.9;lineage2.1 None
SRR6046210 Other lineage4 None
ERR4821172 RR-TB lineage4.9 None
ERR4821272 RR-TB lineage4.1.2.1 None
ERR4821655 Sensitive lineage4 None
SRR5709861 Sensitive lineage1.2.1.2.1 th
ERR4821263 Other lineage4.1.3 gb
SRR6045664 Other lineage4.2.1 None
SRR6046141 Other lineage4.9 None
SRR6045832 HR-TB lineage4.9 None
SRR6045795 HR-TB lineage2.2.1 None
SRR6044876 Sensitive lineage4 None
SRR6045892 Sensitive None
SRR6044835 Sensitive lineage4 None
ERR323037 HR-TB lineage4 None
SRR6045010 Other lineage4 None
SRR6045191 Sensitive lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
SRR6511621 HR-TB None
SRR6046385 Other lineage4.9 None
SRR6789624 MDR-TB lineage4.1 None
ERR485006 HR-TB lineage4.9 None
ERR502474 Pre-XDR-TB lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831657 MDR-TB lineage2.2.1 None
ERR502510 Sensitive lineage4 None
SRR6982239 HR-TB lineage4.1.1.3 None
SRR6855695 Sensitive lineage4.8 None
ERR323107 Other lineage4 None
SRR8217918 HR-TB None
SRR7496471 Sensitive None
SRR7645906 Other lineage2.2.1 None
SRR7535082 Sensitive lineage4 None
SRR9970978 Sensitive lineage4.1.2 None
SRR7645899 RR-TB lineage2.2.1 None
SRR9970980 Other lineage4.1.2 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR7645927 Other lineage4.8 None
SRR7645928 RR-TB lineage4.7 None
SRR7645971 Other lineage2.2.1 None
SRR7755657 Other lineage4.8 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR7755655 Other lineage4.1.2.1 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
ERR323085 Sensitive lineage4 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR323066 Sensitive lineage4 None
ERR037235 Sensitive lineage4.9 None
ERR1023525 HR-TB lineage4 None
ERR067712 HR-TB lineage4 None
ERR067699 HR-TB lineage4 None
ERR1063896 Sensitive None
ERR1034634 HR-TB None
ERR1035122 Sensitive None
ERR1063855 Other lineage4 None
ERR1063857 HR-TB None
ERR1063883 Sensitive lineage4 None
ERR1063839 HR-TB lineage2.2 None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR10796597 Other lineage4 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR108471 HR-TB lineage4 None
ERR133825 Sensitive lineage4 None
ERR137286 Sensitive lineage4 None
ERR323115 Sensitive lineage4 None
ERR3283014 HR-TB None
ERR3273109 MDR-TB lineage4 None
ERR3283021 HR-TB None
ERR3283028 Other None
ERR3283025 HR-TB None
ERR3283031 HR-TB None
ERR3283030 HR-TB lineage4.9 None
ERR3445501 HR-TB None
ERR3283040 HR-TB None
ERR3283046 MDR-TB lineage4.9 None
ERR3283047 HR-TB None
ERR3283057 HR-TB lineage4 None
ERR3797065 MDR-TB lineage4 None
ERR3445502 HR-TB lineage4 None
ERR3797047 HR-TB lineage4 None
ERR3797048 HR-TB None
ERR3797015 HR-TB None
ERR3797063 HR-TB None
ERR3797068 Other La1.8.1 None
ERR387051 HR-TB None
ERR3797064 Sensitive None
ERR3797086 Other lineage4.9 None
ERR3797087 Sensitive lineage4 None
ERR3797080 HR-TB lineage4.9 None
ERR3797079 Sensitive lineage4 None
ERR405209 Sensitive lineage4 None
ERR4024991 Other None
ERR473334 HR-TB lineage4.9 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR4188247 HR-TB None
ERR4596910 Sensitive lineage4 None
ERR473323 HR-TB lineage4.9 None
ERR473303 Sensitive lineage4.9 None
ERR473367 Sensitive lineage4.9 None
ERR4769552 Other La1.3 None
ERR4769442 HR-TB lineage4 None
ERR4769521 HR-TB None
ERR4769444 HR-TB lineage4.9 None
ERR4769474 HR-TB lineage4 None
ERR4769516 Other La1.3 None
ERR4769514 Other La1.3 None
ERR4769550 Other lineage4.9;La1.3 None
ERR4796577 MDR-TB None
ERR4769555 Other La1.3 None
ERR4796929 Sensitive lineage4 None
ERR4797474 Other None
ERR4797184 Sensitive lineage4 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4797264 Sensitive None
ERR4798823 HR-TB lineage4 None
ERR4798099 Other None
ERR6358951 HR-TB lineage4 None
ERR4799378 Sensitive lineage4 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4810624 HR-TB lineage2.2 None
ERR6359066 HR-TB lineage4 None
ERR6358979 Other None
ERR6359070 Other lineage4.9 None
ERR6359069 Other lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR6359125 MDR-TB lineage4.6.1.2 None
ERR6866022 Other None
ERR6866410 Sensitive None
ERR736848 HR-TB None
ERR6866547 Sensitive lineage4 None
ERR736831 HR-TB lineage4.9 None
ERR736834 Sensitive lineage4 None
ERR736837 Other lineage4.9 None
ERR736872 Sensitive lineage4 None
ERR736856 HR-TB lineage4 None
ERR9119669 HR-TB None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR751326 Sensitive lineage4 None
ERR9125730 HR-TB lineage1.2.1.2.1 None
ERR970441 RR-TB lineage2.2.1.1 None
ERR970413 MDR-TB lineage2.2.1 None
ERR970445 MDR-TB lineage2.2.1 None
SRR1062928 RR-TB lineage4 None
ERR987765 Sensitive lineage4.6.1.1 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR10808399 Sensitive lineage4 None
SRR10808668 Sensitive lineage2.2.1 None
SRR10809074 Sensitive lineage4 None
SRR10808805 Sensitive None
SRR10993951 RR-TB La1.6 None
SRR1172807 Sensitive lineage4.9 None
SRR1172717 Other lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR1140736 RR-TB None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR11462861 Other La1.8.1 None
SRR1158918 Sensitive lineage4 None
SRR1173170 Other lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
SRR1173515 HR-TB lineage4.9 None
SRR1173385 Sensitive lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR1173568 Other lineage4.9 None
SRR1173777 Other lineage4 None
SRR1173740 Other None
SRR1173770 Other lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR1175496 HR-TB lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1175507 MDR-TB lineage4 None
SRR1175512 Sensitive lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1175508 Other lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180413 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1180440 Other lineage4.9 None
SRR1180996 HR-TB lineage4 None
SRR1180446 Other lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181214 Other lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181325 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1181351 Sensitive lineage4.9 None
SRR1181368 Other lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1184021 Sensitive lineage4.9 None