EBG00000313339 - n.42A>G


Drug resistance types
112 Sensitive 5 RR-TB 57 HR-TB 15 MDR-TB 7 Pre-XDR-TB 0 XDR-TB 48 Other
lineage Counts
lineage Count
lineage4.9 142
lineage4.8 2
La1.7;lineage3.1;lineage4 1
La3;lineage4.9 6
La3;lineage4.3.4 1
La1;lineage2;lineage4.9 1
M.canetti;lineage1 1
lineage4.3.2.1 3
lineage4.1.1.3 3
lineage2.2.1.1 1
La1.7;lineage4.9 4
lineage4 3
lineage4.3.4.2.1 5
lineage2.2.1 16
lineage2.2.1;lineage4.9 2
lineage4.1.2.1 3
lineage4.4.1.1.1 2
M.canetti;lineage4.9;lineage9 1
lineage4.1.2 1
lineage4.6.1.1 2
lineage4.1.3 1
La1;lineage4.9 2
lineage4.4.1.2 1
lineage1.1.2 3
La1.7;lineage4.9;lineage7 3
lineage4.2.1 3
lineage4.3.3 3
lineage4.9;lineage7 2
lineage1.2.1.2.1 3
lineage4.1.2.1;lineage4.4.1.1 1
La1.7;lineage4.9;lineage6 1
lineage2.2 1
1
lineage2;lineage4.9 1
La2;lineage4.9 1
lineage2.1;lineage4.9 2
La1.2;La1.8.1 1
lineage2.2.2 1
lineage1.2.2.2 1
lineage3 1
lineage1.1.3.1 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage3;lineage4 1
La1;lineage4.1.2 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage4.1.1.3;lineage4.9 1
lineage4.1.2.1;lineage4.4.1 1
lineage1.1.1 1
lineage4.7 1
La2;lineage2.2 1
lineage2.2.1;lineage4 1
spoligotype Counts
spoligotype Count
None 244
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1175487 Sensitive lineage4.9 None
ERR926160 Sensitive lineage4.9 None
ERR736856 Sensitive lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
ERR2229198 Sensitive lineage4.8 None
SRR5341384 HR-TB lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR1063855 Other lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR212123 Other lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR3797063 Sensitive La3;lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR3283011 Other La3;lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
SRR1184308 Sensitive lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR970441 RR-TB lineage2.2.1.1 None
ERR4814639 HR-TB lineage4.9 None
ERR485006 HR-TB lineage4.9 None
ERR926163 Other lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR5341303 Sensitive lineage4.9 None
ERR323037 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR1181349 Sensitive lineage4 None
ERR926154 Sensitive lineage4.9 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
SRR1175512 Sensitive lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
ERR4819383 RR-TB lineage4.9 None
ERR970413 MDR-TB lineage2.2.1 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR970445 MDR-TB lineage2.2.1 None
SRR6046141 Other lineage4.9 None
SRR1140736 Other lineage4.1.2.1 None
SRR1175513 Sensitive lineage4.9 None
ERR926157 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR7645906 Other lineage2.2.1 None
SRR1175052 HR-TB lineage4.9 None
ERR387051 Other lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR1172807 Sensitive lineage4.9 None
ERR502511 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1140753 RR-TB lineage4.3.4.2.1 None
ERR9119669 HR-TB lineage4.9 None
SRR7755655 Other lineage4.1.2.1 None
SRR9970980 HR-TB lineage4.1.2 None
SRR5341400 Sensitive lineage4.9 None
SRR7645899 Other lineage2.2.1 None
ERR4817667 HR-TB lineage4.8 None
ERR6866410 Sensitive lineage4.9 None
ERR987765 Sensitive lineage4.6.1.1 None
SRR12708415 HR-TB lineage2.2.1 None
ERR323107 Sensitive lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR1180148 Sensitive lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4819051 Sensitive lineage4.9 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR3675582 Other lineage4.9 None
ERR4816198 Sensitive lineage4.1.3 None
SRR12708392 Other lineage2.2.1 None
SRR10808805 Other La1;lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR751326 Other lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1196545 Sensitive lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR5341453 Other lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR21677886 Sensitive lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR5341308 Sensitive lineage4.9 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SRR5341467 Other lineage4.9 None
SRR5341298 Sensitive lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR1181351 Sensitive lineage4.9 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR5341299 HR-TB lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
SRR12708419 Other lineage4.3.3 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR926156 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR5709861 Sensitive lineage1.2.1.2.1 th
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR1181214 Other lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
SRR6045832 Other lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR4798823 HR-TB lineage4 None
SRR1180250 Other lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR137286 Other lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR4769444 HR-TB lineage4.9 None
ERR323066 Sensitive lineage4.9 None
ERR1199132 Sensitive lineage4.6.1.1 None
SRR1180406 Sensitive lineage4.9 None
SRR10808668 Sensitive lineage2.2.1 None
SRR1173568 Sensitive lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR4810624 MDR-TB lineage2.2 None
ERR1063896 Sensitive None
SRR1180300 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
SRR1180391 Sensitive lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR1159378 Other lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
SRR5153091 HR-TB lineage4.3.3 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR5341310 Other lineage1.1.2 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR926162 Sensitive lineage4.9 None
ERR176741 Other lineage4.9 None
SRR12708371 HR-TB lineage4.1.1.3 None
SRR1184021 Sensitive lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
SRR5341293 Sensitive lineage4.9 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR5341366 Sensitive lineage4.9 None
SRR1173515 Sensitive lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
ERR161037 Other lineage4.9 None
ERR6359069 Sensitive lineage4.9 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
ERR4819933 Sensitive lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR6511621 Sensitive lineage4.9 None
ERR4820030 Other lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
ERR212138 HR-TB lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR4596910 Sensitive lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
SRR2024953 MDR-TB lineage2.2.1 cn
ERR4819546 HR-TB lineage3 None
ERR926164 Other lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR9125730 HR-TB lineage1.2.1.2.1 None
SRR1173740 Other lineage3;lineage4 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR1180399 Sensitive lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
SRR1173777 Sensitive lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR779852 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
ERR323085 Sensitive lineage4.9 None
ERR736834 Sensitive lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR245675 Sensitive lineage1.1.2 None
ERR736831 Other lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SRR1180996 Sensitive lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
SRR1181368 Other lineage4.9 None
SRR5341387 Other lineage4.9 None
SRR7755649 MDR-TB lineage4.2.1 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
ERR926165 Sensitive lineage4.9 None
SRR6046385 Sensitive lineage4.9 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
SRR1180410 Sensitive lineage4.9 None
SRR7535082 Sensitive lineage4.9 None
ERR4819314 Other lineage1.1.1 None
SRR1158918 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR7645928 Other lineage4.7 None
SRR5341373 Other lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR1172717 Sensitive lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR5341455 Sensitive lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
SRR1173385 Sensitive lineage4.9 None
ERR702405 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR736848 Other lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR12708418 HR-TB lineage2.2.1 None
SRR16058013 HR-TB lineage1.2.1.2.1 None
ERR067712 Sensitive lineage4.9 None
ERR323115 Sensitive lineage4.9 None