lineage | Count |
---|---|
lineage4.1.2.1 | 1 |
lineage4.9 | 27 |
lineage3 | 2 |
15 | |
lineage2.2.1 | 3 |
lineage4 | 20 |
lineage2.2 | 4 |
lineage4.3.4.1 | 1 |
lineage4.3.4.2.1 | 2 |
La1.3 | 1 |
lineage4.9.1 | 1 |
lineage4.3.3 | 1 |
La3 | 1 |
lineage3.1.3 | 1 |
lineage4;lineage2.2 | 1 |
lineage4.3 | 1 |
lineage4;lineage2 | 1 |
lineage4.8 | 1 |
spoligotype | Count |
---|---|
None | 84 |
ID | Drug resistance | Lineage | Country iso2 | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR6044780 | Other | lineage4.9 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR1023509 | Other | None | ERR4821143 | RR-TB | lineage4.9 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045010 | Other | lineage4 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6046210 | Other | lineage4 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR036207 | Other | lineage4.9 | None | ERR1034634 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR067712 | HR-TB | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR108471 | HR-TB | lineage4 | None | ERR3283047 | HR-TB | None | ERR3283028 | Other | None | ERR3283014 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR4798823 | HR-TB | lineage4 | None | ERR4769514 | Other | La1.3 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR245758 | Other | lineage4.9.1 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR1169306 | Other | None | SRR1169249 | Other | La3 | None | SRR1167384 | Other | lineage4 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1173740 | Other | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR8692822 | Other | lineage4.9 | None | SRR8692790 | RR-TB | lineage4 | None | ERR176643 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4814639 | HR-TB | lineage4 | None | SRR8692824 | Other | lineage4.9 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | ERR176568 | Other | lineage4.3 | None | ERR212033 | HR-TB | None | ERR212001 | HR-TB | None | ERR176751 | HR-TB | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816852 | Other | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4819051 | Other | lineage4 | None | ERR4818561 | HR-TB | lineage4 | None |
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