lineage | Count |
---|---|
lineage4.9 | 17 |
lineage4 | 9 |
12 | |
lineage4.8 | 8 |
lineage3 | 9 |
lineage4.3.4.2 | 1 |
lineage4.5 | 1 |
lineage4.1.2.1 | 2 |
lineage2.2.1 | 2 |
lineage4.7 | 1 |
lineage4.1.2 | 1 |
lineage4.3.4.2.1 | 4 |
lineage4.4.1.1;lineage4.1.2.1 | 1 |
La1.6 | 1 |
spoligotype | Count |
---|---|
None | 69 |
ID | Drug resistance | Lineage | Country iso2 | SRR16156188 | HR-TB | lineage4.9 | None | SRR20632814 | Sensitive | lineage4 | None | ERR1750907 | RR-TB | None | ERR2229147 | Other | lineage4.8 | None | ERR2228965 | Other | lineage4.8 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4816470 | Other | lineage3 | None | ERR4816729 | Sensitive | lineage4.9 | None | ERR2229366 | Other | lineage4.8 | None | ERR2228810 | RR-TB | lineage4 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR2228890 | Other | lineage4 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR4815816 | Other | lineage4.5 | gb | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR2513259 | Other | lineage3 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR017781 | Other | lineage3 | None | SRR7496471 | Sensitive | None | SRR7496523 | Other | lineage4.7 | None | ERR019855 | Other | lineage3 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR1034634 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR1213920 | HR-TB | lineage4.1.2 | None | ERR3283047 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283031 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797064 | Sensitive | None | ERR736816 | Other | lineage4.9 | None | ERR3797087 | Sensitive | lineage4 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1173740 | Other | None | SRR10993951 | RR-TB | La1.6 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1140736 | RR-TB | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None |
---|