lineage | Count |
---|---|
lineage4.2.1 | 1 |
12 | |
La1.4 | 1 |
lineage4.9 | 11 |
lineage4 | 16 |
lineage2.1 | 1 |
lineage3 | 1 |
lineage4.8 | 1 |
lineage4.1.2 | 2 |
lineage4.1.1.2 | 1 |
lineage1.1.2 | 1 |
lineage2.2.1 | 6 |
lineage2.2.1.1 | 1 |
spoligotype | Count |
---|---|
None | 55 |
ID | Drug resistance | Lineage | Country iso2 | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR14801749 | Sensitive | None | SRR16278274 | Other | La1.4 | None | SRR16156775 | Other | lineage4.9 | None | ERR176779 | HR-TB | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | None | ERR176651 | HR-TB | None | ERR4814639 | HR-TB | lineage4 | None | ERR181887 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR212138 | HR-TB | lineage4 | None | ERR2229198 | MDR-TB | lineage4.8 | None | SRR4035791 | Sensitive | lineage4.1.2 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4818536 | Other | lineage4.9 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | ERR4819462 | Other | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | ERR1035138 | MDR-TB | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323045 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR1035157 | Other | lineage4.9 | None | ERR1063859 | HR-TB | None | ERR3445503 | HR-TB | None | ERR133825 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4798823 | HR-TB | lineage4 | None | ERR6866547 | Sensitive | lineage4 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR10808490 | Sensitive | lineage2.2.1.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1180446 | Other | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None |
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