EBG00000313339 - n.2401T>C
Drug resistance types
67 Sensitive
13 RR-TB
32 HR-TB
10 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
32 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage2.2.1 | 13 |
| lineage4 | 47 |
| lineage4.9 | 48 |
| lineage4.8 | 3 |
| lineage4.8;lineage4.2.1.1 | 1 |
| 9 | |
| lineage4.3.2.1 | 2 |
| lineage4.1.2 | 2 |
| lineage4.1.2.1 | 2 |
| lineage4.3.3 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4.1.1 | 1 |
| lineage4.2.1 | 2 |
| lineage1.1.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage2.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage5.1.1 | 1 |
| La1.8.1 | 3 |
| lineage4.2.2 | 1 |
| lineage4.9.1 | 1 |
| lineage2.2 | 1 |
| La1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.5 | 1 |
| lineage2.2.2 | 1 |
| lineage3 | 1 |
| lineage4.3.4.2 | 1 |
| lineage6 | 2 |
| lineage4.4.1.1.1 | 1 |
| La2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 159 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR12708416 | Sensitive | lineage4.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR4815471 | Other | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR4816964 | Other | lineage4.9 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | ERR2228793 | Sensitive | lineage4.8 | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR2027252 | Other | lineage4.8;lineage4.2.1.1 | None | SRR3675555 | HR-TB | None | SRR4033474 | Sensitive | lineage4.3.2.1 | za | ERR4817294 | Other | lineage4.1.2 | None | ERR2513405 | Other | lineage2.2.1 | None | ERR4818536 | Other | lineage4.9 | None | ERR4819622 | Other | lineage4.1.2.1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4821318 | HR-TB | lineage4.6.2.2 | gb | ERR4819641 | HR-TB | lineage4.6.2.2 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR4819933 | Other | lineage4.9 | None | ERR4821796 | Other | lineage4.1.1 | None | SRR6046117 | RR-TB | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR6045503 | HR-TB | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR5818389 | Other | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR5818675 | Sensitive | lineage1.1.2 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | ERR4832061 | Sensitive | lineage2.2.1 | vn | SRR6046611 | HR-TB | lineage4.9 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | ERR323037 | HR-TB | lineage4 | None | ERR4832002 | Pre-XDR-TB | lineage2.1 | None | SRR6982246 | Sensitive | lineage4 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR502943 | HR-TB | None | ERR5311077 | RR-TB | La1.8.1 | None | DRR188816 | Sensitive | lineage4.2.2 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR037504 | Other | lineage4.9.1 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063855 | Other | lineage4 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR1063857 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR349265 | Sensitive | lineage4 | None | ERR3468613 | RR-TB | La1.8.1 | None | ERR349264 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR363506 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR400326 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR387051 | HR-TB | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR4769521 | HR-TB | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR6358951 | HR-TB | lineage4 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | ERR6359066 | HR-TB | lineage4 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | ERR6866807 | HR-TB | lineage4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | ERR983241 | MDR-TB | lineage2.2.1 | None | ERR9786276 | Sensitive | lineage4.8 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR9786705 | Sensitive | lineage4.1.2.1 | None | ERR9787030 | Sensitive | lineage6 | None | ERR9787336 | Other | lineage6 | None | SRR10430377 | MDR-TB | lineage2.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10303325 | MDR-TB | lineage2.2.1 | None | SRR1188184 | Sensitive | lineage4.1.2 | ca | SRR1173515 | HR-TB | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1180446 | Other | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR16156188 | HR-TB | lineage4.9 | None |
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