EBG00000313339 - n.2401T>C
Drug resistance types
12 Sensitive
12 RR-TB
11 HR-TB
13 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
28 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.1 | 3 |
| lineage4.9 | 42 |
| lineage2.2.1 | 9 |
| lineage4.3.4.2 | 1 |
| lineage4.8 | 2 |
| lineage4.9;lineage7 | 1 |
| La2;lineage2.2 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.2.2 | 1 |
| lineage4.8.1 | 1 |
| lineage4.2.1 | 2 |
| lineage4.4.1.1.1 | 2 |
| lineage4.3.2.1 | 1 |
| lineage6.1.2 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage6.1.3 | 1 |
| lineage4.1.1.3 | 2 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.9.1 | 1 |
| lineage3 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.3.3 | 2 |
| lineage4.1.2 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 80 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR5311077 | Other | La1.8.1 | None | ERR323037 | Other | lineage4.9 | None | SRR1184308 | RR-TB | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR10315558 | RR-TB | lineage2.2.1 | None | ERR9786276 | Sensitive | lineage4.8 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR6046141 | Other | lineage4.9 | None | ERR176741 | Other | lineage4.9 | None | SRR10303325 | MDR-TB | lineage2.2.1 | None | ERR216965 | Sensitive | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR867573 | Other | lineage4.9 | None | ERR2513405 | Other | lineage2.2.1 | None | DRR188816 | Other | lineage4.2.2 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR3675582 | Other | lineage4.9 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR736831 | Other | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR6359069 | HR-TB | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | SRR1238558 | Other | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR1180440 | Other | lineage4.9 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | ERR3468613 | Other | La1.8.1 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | ERR387051 | RR-TB | lineage4.9 | None | SRR10430377 | MDR-TB | lineage2.2.1 | None | ERR4818536 | Other | lineage4.9 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR4811030 | Other | lineage4.9 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR3468488 | Other | La1.8.1 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR037504 | Other | lineage4.9.1 | None | SRR1180446 | Other | lineage4.9 | None | ERR3283021 | MDR-TB | lineage4.9 | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR1181403 | Other | lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR9786076 | Other | lineage3 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR6045832 | Other | lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR867575 | Other | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR6982141 | Other | lineage4.3.3 | None |
|---|
