lineage | Count |
---|---|
lineage7;lineage2.2.1.2 | 1 |
lineage4.9 | 20 |
lineage4 | 8 |
lineage4.3.4.2.1 | 2 |
lineage4;lineage2 | 1 |
lineage4.1 | 1 |
lineage4.8 | 2 |
lineage4.3.4.1 | 1 |
lineage3 | 1 |
7 | |
La1.8.1 | 2 |
La1.2 | 1 |
lineage4.9;La1.3 | 1 |
lineage4.5 | 1 |
lineage2.2.1 | 4 |
lineage4.4.1.1.1 | 1 |
La1.4 | 1 |
spoligotype | Count |
---|---|
None | 55 |
ID | Drug resistance | Lineage | Country iso2 | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | ERR4815471 | Other | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4814639 | HR-TB | lineage4 | None | ERR4815815 | Sensitive | lineage4 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | ERR4816964 | Other | lineage4.9 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR2446566 | Other | lineage4.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4817569 | Other | lineage4.3.4.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | SRR5341456 | Other | None | ERR4820397 | Other | lineage4.9 | None | SRR5431730 | Other | La1.8.1 | None | ERR4819933 | Other | lineage4.9 | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR323045 | HR-TB | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046299 | HR-TB | None | ERR3283055 | HR-TB | None | ERR067712 | HR-TB | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR3445503 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3797046 | HR-TB | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359070 | Other | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR736856 | HR-TB | lineage4 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | ERR9786639 | Sensitive | lineage4.8 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR16278274 | Other | La1.4 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None |
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