lineage | Count |
---|---|
lineage4.3.4.2.1 | 1 |
lineage5.1.1 | 9 |
lineage2.2.1 | 7 |
lineage4.9;La1.3 | 1 |
lineage4.9 | 6 |
lineage4.6.1.2 | 4 |
lineage4.8 | 2 |
lineage2.2.2 | 1 |
lineage4.3.2.1 | 2 |
lineage4 | 1 |
lineage5.1.1;lineage4.1.3 | 2 |
2 | |
lineage4.1 | 1 |
lineage6.3.1 | 2 |
spoligotype | Count |
---|---|
None | 41 |
ID | Drug resistance | Lineage | Country iso2 | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR1203054 | Other | lineage5.1.1 | gh | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1203052 | Sensitive | lineage5.1.1 | gh | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR4033888 | Sensitive | lineage4.3.2.1 | None | SRR1735577 | Other | lineage5.1.1 | None | ERR8025477 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR1735574 | Other | lineage5.1.1 | None | SRR2101293 | Other | lineage5.1.1 | None | ERR4813641 | HR-TB | lineage4 | None | SRR998617 | Sensitive | lineage5.1.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR4827435 | MDR-TB | lineage2.2.1 | None | ERR502505 | Sensitive | lineage5.1.1 | gh | SRR998802 | MDR-TB | lineage5.1.1;lineage4.1.3 | None | SRR998803 | MDR-TB | lineage5.1.1;lineage4.1.3 | None | SRR998618 | Sensitive | None | SRR998619 | Sensitive | None | SRR4033511 | Sensitive | lineage4.3.2.1 | None | ERR2432997 | Other | lineage4.8 | None | ERR4821609 | Sensitive | lineage5.1.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR998616 | Sensitive | lineage5.1.1 | None | SRR998627 | Other | lineage6.3.1 | None | SRR998625 | Sensitive | lineage6.3.1 | None |
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