Rv0668 - c.3645G>C


Drug resistance types
20 Sensitive 7 RR-TB 122 HR-TB 26 MDR-TB 10 Pre-XDR-TB 0 XDR-TB 127 Other
lineage Counts
lineage Count
112
lineage4.4.1.1 5
lineage4.9 39
lineage2.2.1 14
lineage4.1.2.1 22
lineage1.1 1
lineage4.3.3 7
lineage5.2 2
lineage4.3.4.2.1 2
lineage3.1 4
lineage1.2.1.2.1 3
La2 1
lineage4.8 11
lineage4.3.4.1 2
lineage4 14
lineage4.1.1.3 3
La1 1
La1.8.1 4
lineage3 9
lineage4.1.3 2
lineage6.1.1 2
lineage6.3.1 3
lineage4.9;La1.3 1
La1.3 4
lineage3.1.2 2
lineage1.2.2.2 1
lineage2 3
lineage4.8;La3 2
lineage1.1.3.2 2
lineage4.1.2.1.1 1
lineage4.3.2 2
lineage1.1.2 2
lineage4.1 2
lineage4.1.1 3
lineage4.6.2.2 2
lineage6.1.3 1
lineage6 1
lineage3.1.2.2;lineage3.1.2.1 1
lineage4.6.1.2 1
lineage2.1 2
lineage2.2 2
lineage4.5 1
lineage4.9;La3 1
lineage2.2.1;La3 1
lineage4.2;La1.7 1
lineage4.9;lineage4.6.3 1
lineage4.1.1.1 1
lineage6.3;lineage2.2.1 1
lineage3;lineage2.2.1 1
lineage4;lineage2 1
lineage4;lineage1.1.2 1
lineage4.2.2.2 1
lineage4.7 1
lineage4.9;lineage3.1.2.1 1
lineage4;lineage1.1 1
spoligotype Counts
spoligotype Count
None 312
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6045952 HR-TB None
SRR6044790 HR-TB None
SRR6045233 HR-TB None
SRR6046066 HR-TB None
SRR6046521 Other lineage4.4.1.1 None
SRR6045359 Sensitive lineage4.9 None
SRR6325442 HR-TB None
SRR6046225 HR-TB None
SRR6046305 Other lineage4.9 None
SRR6046514 HR-TB None
SRR6325444 HR-TB None
SRR6046540 HR-TB None
SRR6325448 HR-TB None
SRR6325447 HR-TB None
SRR6458421 MDR-TB lineage2.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6785527 Sensitive lineage2.2.1 None
SRR6397654 HR-TB lineage4.1.2.1 None
ERR3077978 Other lineage1.1 None
SRR6831950 Other lineage4.3.3 None
ERR294248 HR-TB None
ERR4872094 MDR-TB lineage5.2 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR6785267 Other lineage2.2.1 None
ERR323034 HR-TB lineage3.1 None
SRR6789626 Other None
ERR502532 HR-TB None
ERR3077902 Sensitive lineage1.2.1.2.1 None
ERR323036 HR-TB None
ERR502524 HR-TB La2 None
SRR7131023 Other lineage4.1.2.1 None
ERR5311099 HR-TB None
ERR5311090 HR-TB None
ERR5311081 HR-TB None
ERR11466174 Other lineage4.8 None
ERR323038 HR-TB None
SRR7496509 Other None
SRR7496517 Other None
ERR323039 HR-TB None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR323041 HR-TB None
ERR11466499 Other lineage4.3.4.1 None
ERR323053 HR-TB None
ERR323063 HR-TB None
ERR323043 HR-TB None
ERR323055 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR067712 HR-TB lineage4 None
ERR036207 Other lineage4.9 None
ERR11465024 Other lineage4.1.1.3 None
ERR1035157 Other lineage4.9 None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR3283010 Other La1 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR11049020 Other lineage4.8 None
ERR3283036 HR-TB None
ERR3283017 HR-TB None
ERR3283027 HR-TB None
ERR3283048 HR-TB lineage4.9 None
ERR3797016 HR-TB None
ERR3468544 HR-TB None
ERR3283051 Other lineage4.9 None
ERR3797023 HR-TB La1.8.1 None
ERR4407452 Sensitive lineage3 None
ERR3797083 HR-TB None
ERR3804169 HR-TB lineage4.1.3 None
ERR4407463 HR-TB None
ERR3797071 Other lineage4.9 None
ERR3797069 Other None
ERR3799304 Other lineage6.1.1 None
ERR3804162 Sensitive lineage6.3.1 None
ERR3804155 Other lineage4.1.2.1 None
ERR4188350 HR-TB None
ERR4769550 Other lineage4.9;La1.3 None
ERR4596902 HR-TB lineage3 None
ERR4769516 Other La1.3 None
ERR4769514 Other La1.3 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4797037 Pre-XDR-TB lineage3.1.2 None
ERR4797201 Other lineage1.2.2.2 None
ERR4769552 Other La1.3 None
ERR4769555 Other La1.3 None
ERR4796351 MDR-TB lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4798648 HR-TB lineage3.1.2 None
ERR4798504 Other lineage3 None
ERR4798823 HR-TB lineage4 None
ERR4800341 Other lineage3 None
ERR4811022 HR-TB None
ERR12015083 Other lineage4.8;La3 None
ERR4810741 HR-TB None
ERR4811105 HR-TB None
ERR4811142 MDR-TB None
ERR5336148 Other None
ERR12268496 Sensitive lineage4.4.1.1 None
ERR5908228 Other lineage4.3.3 None
ERR702406 HR-TB None
ERR6359045 HR-TB None
ERR5917710 Other lineage4.1.2.1 None
ERR6326069 Pre-XDR-TB lineage4.3.4.1 None
ERR6358837 HR-TB None
ERR736848 HR-TB None
ERR736867 HR-TB None
ERR736865 HR-TB None
ERR736874 HR-TB None
ERR7821123 Other lineage1.1.3.2 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR772255 MDR-TB lineage4.3.2 None
ERR7821126 Sensitive lineage1.1.3.2 None
ERR8976043 HR-TB None
ERR9119500 MDR-TB lineage5.2 None
ERR9117805 Other lineage4.3.2 None
ERR9117709 HR-TB None
ERR9117721 HR-TB lineage1.1.2 None
ERR9119096 Other lineage4.3.3 None
ERR9786443 Sensitive lineage4.8 None
ERR9786421 Other lineage4.1.2.1 None
ERR9786440 Other lineage4.1 None
ERR9786569 Other lineage4.8 None
ERR9786444 Sensitive lineage4.8 None
ERR9786617 Other lineage4.1.1 None
ERR9786604 Other None
ERR9786642 Other lineage4.1.2.1 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786627 Other lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786671 Other None
ERR9786682 Other lineage4.1.2.1 None
ERR9787014 Other lineage6.1.1 None
ERR9786694 Other lineage4.1.2.1 None
ERR9787197 Other None
ERR9787153 Other lineage6.1.3 None
ERR9787139 Other lineage6.3.1 None
ERR9787165 Other lineage6 None
ERR987722 HR-TB None
ERR9787223 Sensitive lineage6.3.1 None
SRR1165423 Other lineage4.1.2.1 None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
ERR990545 Other lineage3 None
SRR11462861 Other La1.8.1 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1162740 Other lineage4.1.2.1 None
SRR1162864 HR-TB lineage4.1.2.1 None
SRR1163221 HR-TB lineage4.1.2.1 None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR1169194 Other None
SRR1172817 HR-TB None
SRR1172234 Other None
SRR1172310 HR-TB None
SRR1172728 MDR-TB None
SRR1172857 MDR-TB None
SRR1172844 MDR-TB lineage4.4.1.1 None
SRR1173153 HR-TB None
SRR1172951 Other None
SRR1173118 Other None
SRR1173218 Pre-XDR-TB lineage4.3.3 None
SRR1173384 Other lineage4 None
SRR1173363 HR-TB None
SRR1173400 Other None
SRR1173484 Other lineage4 None
SRR1173515 HR-TB lineage4.9 None
SRR1173562 HR-TB lineage4 None
SRR1173633 HR-TB lineage4.9 None
SRR1175074 MDR-TB None
SRR1173778 Other None
SRR1173788 Other None
SRR1174897 HR-TB None
SRR1173629 Other None
SRR1173706 Other lineage4.9 None
SRR1173767 HR-TB lineage4.4.1.1 None
SRR1175049 RR-TB None
SRR1175090 Other lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR1180440 Other lineage4.9 None
SRR1175491 MDR-TB lineage4 None
SRR1184294 HR-TB None
SRR1184346 HR-TB lineage3.1 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184308 Sensitive lineage4.9 None
SRR1184329 MDR-TB lineage4.9 None
SRR1184372 MDR-TB None
SRR1196474 HR-TB lineage3.1 None
SRR1184380 HR-TB None
SRR1196478 MDR-TB lineage4.9 None
SRR1184381 MDR-TB None
SRR1184388 Other None
SRR1196545 HR-TB lineage4.9 None
SRR1196494 MDR-TB None
SRR1196566 HR-TB None
SRR1196546 HR-TB None
SRR12142341 HR-TB None
SRR1196677 HR-TB lineage2 None
SRR1196768 MDR-TB None
SRR13861439 RR-TB lineage4.9 None
SRR13591342 HR-TB lineage4.1.1.3 None
SRR13837424 Sensitive lineage4.9 None
SRR13861322 Other lineage4.9 None
SRR13861326 Other lineage4.9 None
SRR13861368 RR-TB lineage4.9 None
SRR12416824 HR-TB None
SRR13861151 RR-TB lineage4.9 None
SRR13861304 Other lineage4.9 None
SRR13861372 Other lineage4.9 None
SRR13861397 HR-TB lineage4.9 None
SRR13861646 Other lineage4.9 None
SRR13861549 RR-TB lineage4.9 None
SRR13861596 Other lineage4.9 None
SRR13861484 RR-TB lineage4.9 None
SRR1510066 Other lineage1.2.1.2.1 None
SRR1640750 HR-TB None
SRR25827687 MDR-TB lineage1.1.2 None
SRR15368973 Other None
SRR19304036 HR-TB None
SRR1710057 Other lineage2.1 None
SRR17832802 HR-TB lineage3 None
SRR18910194 HR-TB lineage2.2 None
SRR19303884 HR-TB None
SRR1791696 Other La1.8.1 None
SRR18003019 Other lineage2.2.1 None
SRR18213713 HR-TB lineage4.5 None
SRR20969677 HR-TB lineage2 None
SRR8692790 RR-TB lineage4 None
SRR22424787 Sensitive lineage4.9 None
ERR11082350 MDR-TB lineage4.6.2.2 None
SRR25827682 Other None
SRR8692782 Other lineage4.9 None
SRR8692887 Other None
SRR8692894 Other lineage4.9 None
SRR26399973 Other lineage4.9;La3 None
SRR21732980 Other lineage4.3.3 None
SRR26937071 MDR-TB lineage2.2.1;La3 None
SRR23961559 Other lineage4.2;La1.7 None
SRR26159043 Other lineage4.9 None
SRR26159047 Other lineage4.9;lineage4.6.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR4815604 HR-TB None
SRR28119811 Other lineage6.3;lineage2.2.1 None
SRR25827497 Pre-XDR-TB lineage3;lineage2.2.1 None
ERR4813861 Other lineage4.3.3 None
SRR3675464 HR-TB lineage4.1 None
ERR4814352 HR-TB lineage2.2.1 None
ERR176793 Other lineage4.1.1 None
SRR6325445 HR-TB None
SRR3675482 HR-TB None
SRR3675465 HR-TB None
ERR1035239 HR-TB None
ERR161033 HR-TB None
SRR3416776 Other lineage2.1 None
SRR3675486 HR-TB None
ERR4814639 HR-TB lineage4 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR3675221 HR-TB None
SRR3675383 HR-TB None
SRR3675236 HR-TB None
SRR3675232 Other lineage4.1.2.1 None
SRR3675311 Other None
ERR4816151 Other lineage4.8 None
ERR2027263 Other lineage4 None
SRR3675545 HR-TB None
ERR4815752 Other lineage4.9 None
ERR2229542 Other lineage4.8 None
ERR4816999 Other None
ERR4817037 Other lineage4.9 None
SRR3675558 HR-TB None
ERR4816585 Other lineage2.2 None
ERR4816515 Sensitive lineage1.2.1.2.1 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR3742665 HR-TB None
SRR3675572 Other None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR4817893 Other lineage4.8;La3 None
ERR4815815 Sensitive lineage4 None
ERR4817667 HR-TB lineage4.8 None
ERR502912 Other lineage2.2.1 None
ERR4816762 Other lineage4;lineage2 None
ERR4817692 HR-TB lineage4;lineage1.1.2 None
SRR7496472 Other None
ERR4817896 HR-TB lineage2.2.1 None
ERR553132 MDR-TB lineage4.1.2.1 None
ERR2509673 Other lineage2.2.1 None
ERR4818021 Other La1.8.1 None
ERR2229143 Other lineage4.1.1 None
ERR234659 HR-TB None
ERR2513470 Other lineage4.2.2.2 None
ERR3275201 Sensitive lineage4.8 nl
ERR4818615 Other None
SRR5007188 Other lineage4 None
ERR4818536 Other lineage4.9 None
ERR4818561 HR-TB lineage4 None
ERR4819932 Other lineage4.7 None
ERR4820335 Other lineage4.1.2.1 None
ERR4819462 Other lineage4 None
ERR2514390 Sensitive lineage4.9;lineage3.1.2.1 None
SAMN02414850 Other lineage4.1.2.1 None
ERR4819781 Other lineage2.2.1 None
SRR5341302 HR-TB None
ERR4820854 Other lineage4.1.2.1 None
ERR4819280 Sensitive lineage4 None
ERR4819322 Other lineage4;lineage1.1 None
ERR4819546 HR-TB lineage3 None
SRR5341333 HR-TB None
SRR5341332 Pre-XDR-TB lineage3 None
SRR5341470 HR-TB None
ERR2446570 Sensitive lineage4.8 nl
ERR2517514 Sensitive lineage4.8 None
ERR4821053 Other lineage3 None
ERR278594 HR-TB None
ERR2693239 HR-TB None
ERR4821578 Other lineage4.1.2.1 None