lineage | Count |
---|---|
2 | |
lineage2.2.1 | 8 |
lineage4.7 | 1 |
lineage4.3.2.1 | 1 |
lineage3 | 5 |
lineage4 | 6 |
La1.8.1 | 2 |
La1.3 | 1 |
lineage2.2.2 | 1 |
lineage4.3.2 | 1 |
lineage5.1.1 | 1 |
lineage4.9 | 11 |
lineage4;lineage2 | 1 |
lineage4.8 | 1 |
lineage3.1.2.1 | 1 |
spoligotype | Count |
---|---|
None | 43 |
ID | Drug resistance | Lineage | Country iso2 | SRR7496471 | Sensitive | None | SRR9971114 | Other | lineage2.2.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR4820586 | Other | lineage3 | gb | SRR9971113 | Other | lineage2.2.1 | None | ERR067712 | HR-TB | lineage4 | None | ERR4132460 | MDR-TB | lineage2.2.1 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769436 | Other | La1.3 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | SRR11462861 | Other | La1.8.1 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR751345 | Other | lineage5.1.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR16156751 | RR-TB | lineage4.9 | None | ERR4816470 | Other | lineage3 | None | ERR4814639 | HR-TB | lineage4 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR2229791 | RR-TB | lineage4.9 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817915 | RR-TB | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR1023509 | Other | None | SRR6046376 | Other | lineage3 | None |
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