Rv1484 - p.Ser73Thr
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
6 Sensitive
3 RR-TB
41 HR-TB
19 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
14 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 5 |
| M.canetti;lineage2.1;lineage4.9 | 16 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | 1 |
| lineage4.9 | 13 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 2 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 2 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| M.canetti;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9 | 3 |
| M.canetti;lineage4.3.1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage2.2.1 | 2 |
| lineage1.1.1 | 1 |
| lineage4.1.1.1 | 1 |
| M.canetti;lineage2.1 | 1 |
| La1.6 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 1 |
| lineage1.1 | 1 |
| M.canetti;lineage2.2 | 1 |
| lineage4.5 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage2.2 | 2 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 4 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| 1 | |
| lineage4.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| lineage1.1.2 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.1.1;lineage4.9 | 1 |
| La1.7.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 84 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR5311096 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675320 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | None | ERR5311090 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR1873393 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675554 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675545 | Other | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675444 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4188342 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3468607 | Other | lineage4.9 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR2693242 | RR-TB | lineage2.1;lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR126608 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR9119138 | RR-TB | M.canetti;lineage4.3.1;lineage4.9 | None | ERR5311082 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | SRR20969708 | HR-TB | lineage2.2.1 | None | ERR4188350 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | ERR5311099 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6325447 | HR-TB | lineage4.1.1.1 | None | ERR323041 | HR-TB | M.canetti;lineage2.1 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR11268039 | Other | La1.6 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR124652 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6045952 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675322 | HR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR5311083 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR5311100 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311101 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3077978 | Other | lineage1.1 | None | ERR1873396 | Pre-XDR-TB | M.canetti;lineage2.2 | None | SRR29096425 | Sensitive | lineage4.9 | None | ERR3468544 | Other | lineage2.1;lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR8976043 | HR-TB | lineage2.2 | None | SRR6045948 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR29096107 | Sensitive | lineage4.9 | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR3675450 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR1640750 | Other | None | SRR29096203 | Sensitive | lineage4.9 | None | ERR6358837 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR3797016 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | SRR6046514 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR323040 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675486 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR21733183 | RR-TB | lineage1.1.2 | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR3283016 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR3675561 | Other | M.canetti;lineage2.1;lineage4.9 | None | SRR29097023 | Sensitive | lineage4.9 | None | ERR5311089 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR20970016 | Other | lineage2.2.1 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR6325442 | HR-TB | lineage4.1.1;lineage4.9 | None | SRR7240492 | HR-TB | La1.7.1 | None |
|---|
