lineage | Count |
---|---|
31 | |
lineage4 | 2 |
lineage4.3.4.2 | 1 |
lineage3.1.2 | 1 |
lineage4.9 | 2 |
lineage4.5 | 1 |
lineage2.2.1.1 | 4 |
lineage7;lineage2.2.1.2 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage4.2.1.1 | 1 |
La2 | 1 |
spoligotype | Count |
---|---|
None | 46 |
ID | Drug resistance | Lineage | Country iso2 | ERR3439432 | Other | None | ERR3445504 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR4812075 | Sensitive | lineage4.3.4.2 | None | ERR3797046 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4811493 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | SRR1172310 | HR-TB | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1174897 | HR-TB | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR3675550 | Other | None | ERR158583 | HR-TB | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | ERR1035162 | Other | None | SRR5341418 | Other | None | SRR5341470 | HR-TB | None | ERR1035138 | MDR-TB | None | ERR1023509 | Other | None | SRR5341456 | Other | None | SRR6046362 | HR-TB | None | SRR6044838 | Other | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6045399 | Other | None | SRR6046460 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046492 | Other | None | ERR323039 | HR-TB | None | ERR4831117 | HR-TB | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | ERR502524 | HR-TB | La2 | None | ERR502889 | Other | None | ERR1034652 | Other | None | ERR323053 | HR-TB | None | ERR067681 | HR-TB | None | ERR133986 | HR-TB | None | ERR3283055 | HR-TB | None |
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