Rv3245c - c.-383G>C
Drug resistance types
17 Sensitive
1 RR-TB
36 HR-TB
3 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
48 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 59 |
| La1.7;lineage4.9 | 2 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| La3;lineage4.9 | 7 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La3;lineage4 | 1 |
| lineage2.2.1 | 3 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| lineage4.1.2.1 | 1 |
| La1.6;La3;lineage4.9 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| La1.8.1 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage4 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| lineage4.9;lineage7 | 2 |
| lineage3 | 1 |
| lineage4.5 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 107 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4815441 | HR-TB | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR3283014 | Other | La3;lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR926155 | Other | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | SRR28351584 | HR-TB | lineage2.2.1 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR11465597 | Sensitive | lineage4.1.2.1 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR926156 | Other | lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | ERR369163 | Other | lineage4.9 | None | ERR9119669 | MDR-TB | lineage4.9 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662694 | Other | lineage4.9 | None | SRR23961558 | RR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR3797063 | Other | La3;lineage4.9 | None | ERR926160 | Other | lineage4.9 | None | ERR3283032 | Other | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR3797085 | Other | lineage4.9 | None | ERR349264 | Other | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR363498 | Other | lineage4.9 | None | SRR5431730 | Other | La1.8.1 | None | SRR6045706 | Other | lineage4.9 | None | SRR5341432 | Other | La1.7;lineage4.9;lineage7 | None | ERR4816478 | HR-TB | lineage4 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR363502 | Other | lineage4.9 | None | ERR2693257 | HR-TB | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR369159 | Other | lineage4.9 | None | SRR6045359 | HR-TB | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR4819051 | Sensitive | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR926165 | Other | lineage4.9 | None | SRR5341400 | Sensitive | lineage4.9 | None | ERR3283031 | Other | La3;lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR926157 | Other | lineage4.9 | None | ERR2693231 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.9 | None | SRR3675312 | Sensitive | lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR3675234 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR373946 | Other | lineage4.9 | None | ERR3797014 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR349266 | Other | lineage4.9 | None | ERR971389 | Other | lineage4.9 | None | ERR3797080 | Sensitive | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR349300 | Other | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR6046492 | Other | lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR3283024 | HR-TB | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None |
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