Rv3246c - c.204C>T
Drug resistance types
5 Sensitive
2 RR-TB
21 HR-TB
8 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
46 Other
lineage Counts
| lineage | Count |
|---|---|
| 8 | |
| lineage4.9 | 18 |
| La3;lineage4.9 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 2 |
| lineage2.2.1 | 10 |
| lineage2.1 | 3 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage4.3.3 | 2 |
| lineage4.3.4.2.1 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage3 | 5 |
| lineage3.1 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.8 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage4.5 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage1.2.2.2 | 1 |
| La3 | 2 |
| La1.7;lineage4.9 | 2 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.6.1.1 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage2 | 1 |
| lineage2.1;lineage4.9 | 3 |
| lineage2.2 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| M.canetti;lineage1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 85 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1184381 | MDR-TB | None | SRR1172857 | Other | None | SRR28119805 | Other | lineage4.9 | None | SRR1173153 | Other | lineage4.9 | None | SRR28119827 | Other | La3;lineage4.9 | None | SRR1196566 | Other | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1710057 | Other | lineage2.1 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR3416776 | Other | lineage2.1 | None | ERR4816091 | Sensitive | lineage4.3.4.2.1 | gb | SRR1196546 | Other | lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | SRR7535086 | Other | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1173400 | Other | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797086 | Sensitive | lineage4.9 | None | ERR11082420 | MDR-TB | lineage3 | None | ERR4407452 | Other | lineage3 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR26399265 | Other | lineage2.2.1 | None | SRR1184294 | Other | lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR502912 | Other | lineage2.2.1 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR6789621 | Other | lineage4.9 | None | ERR234659 | Other | None | ERR502908 | HR-TB | lineage2.2.1 | None | SRR12142341 | HR-TB | lineage2.1 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR1184372 | MDR-TB | None | ERR9786639 | Sensitive | lineage4.8 | None | SRR20969435 | Sensitive | lineage2.2.1 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR1172951 | Other | lineage4.9 | None | SRR1173778 | Other | lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR752229 | Other | lineage4.5 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR1175074 | Other | None | SRR1173355 | Other | lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4797588 | MDR-TB | lineage3 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4797201 | Other | lineage1.2.2.2 | None | SRR1172728 | RR-TB | La3 | None | SRR1172817 | Other | La3 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR1173118 | Other | lineage2.2.1 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR1173363 | Other | None | ERR13260023 | MDR-TB | lineage3 | None | ERR13278943 | MDR-TB | lineage3 | None | SRR1196768 | MDR-TB | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR1196583 | Other | lineage4.9 | None | SRR28351584 | HR-TB | lineage2.2.1 | None | ERR6358755 | Other | lineage4.6.1.1 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR18003019 | Other | lineage2.2.1 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1196677 | Other | lineage2.2 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | SRR1184312 | Other | lineage2.2.1 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR26399490 | Sensitive | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None |
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