lineage | Count |
---|---|
lineage2.2.1 | 2 |
lineage3.1 | 1 |
lineage4.9 | 6 |
lineage4.8 | 7 |
lineage2.1 | 1 |
lineage4 | 7 |
lineage3 | 1 |
5 | |
lineage4.5 | 1 |
spoligotype | Count |
---|---|
None | 31 |
ID | Drug resistance | Lineage | Country iso2 | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR3675542 | Other | lineage4.9 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR2228890 | Other | lineage4 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR2229801 | Other | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | ERR2228900 | RR-TB | lineage4.8 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR2514552 | Sensitive | lineage3 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341315 | Sensitive | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR2693238 | HR-TB | lineage4.9 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR502943 | HR-TB | None | ERR400336 | Sensitive | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4831638 | Sensitive | None | ERR1034652 | Other | None | ERR752229 | Other | lineage4.5 | None |
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