Rv1484 - p.Ser117Ala
Drug resistance types
35 Sensitive
5 RR-TB
42 HR-TB
8 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
39 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 48 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 3 |
| lineage2.2 | 4 |
| La1.7;lineage4.9 | 4 |
| lineage4 | 3 |
| lineage4.9;lineage6.1.3 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage2.2.1 | 5 |
| La3;M.canetti;lineage4.9 | 2 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La2;lineage2.2 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| lineage4.1.2 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| La3;lineage4.9 | 2 |
| La1.6;La3;lineage4.9 | 2 |
| lineage4.8 | 1 |
| lineage4.1;lineage4.8 | 2 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.3.2.1 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.6;lineage4 | 1 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.6.1.1 | 2 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| M.canetti;lineage2.2 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage3 | 1 |
| lineage4.2.1 | 1 |
| La1;lineage4.9 | 3 |
| lineage1.1.3.1 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.4.1.2 | 1 |
| lineage1.1.2 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.9;lineage7 | 2 |
| lineage1.1.3.2 | 1 |
| La1.6 | 2 |
| 1 | |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.5 | 1 |
| M.canetti;lineage2.1;lineage4 | 1 |
| La1.2;La1.8.1 | 1 |
| lineage4.1.1.2 | 1 |
| La1;lineage2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 130 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1035122 | Sensitive | lineage4.9 | None | SRR3675450 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR1873393 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR28351339 | MDR-TB | lineage4 | None | ERR473314 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR29096717 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | SRR28351584 | HR-TB | lineage2.2.1 | None | ERR2693229 | RR-TB | La3;M.canetti;lineage4.9 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR6046492 | Other | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR3283032 | Other | lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR3675545 | Other | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR28351554 | Sensitive | La1.6;lineage4 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR038268 | HR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR1873396 | Pre-XDR-TB | M.canetti;lineage2.2 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR29096879 | Sensitive | lineage4.9 | None | SRR26399490 | Sensitive | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR5311082 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR990545 | Other | lineage3 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR28868888 | Other | lineage1.1.3.2 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR13265708 | Sensitive | lineage2.2.1 | None | ERR11268038 | Other | La1.6 | None | ERR6359082 | Other | lineage4.9 | None | ERR11268039 | Other | La1.6 | None | ERR9786843 | Other | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | SRR29096203 | Sensitive | lineage4.9 | None | SRR3675444 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR13285192 | Sensitive | lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR29055611 | Sensitive | lineage4.9 | None | SRR26399239 | Sensitive | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR2693239 | RR-TB | M.canetti;lineage2.1;lineage4 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR13285191 | Sensitive | lineage4.9 | None |
|---|
