lineage | Count |
---|---|
59 | |
La3 | 1 |
lineage4 | 14 |
lineage4.9 | 19 |
lineage4.9;lineage2.2 | 1 |
lineage2.2 | 3 |
lineage4.2.1 | 1 |
lineage7;lineage2.2.1.2 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage4.4.1.1.1 | 1 |
lineage4.3.4 | 2 |
lineage4.3 | 1 |
lineage2.2.1 | 2 |
lineage4.1 | 1 |
La1 | 1 |
La1.8.1 | 1 |
La1.2 | 1 |
lineage4.8 | 1 |
lineage4.5 | 1 |
spoligotype | Count |
---|---|
None | 112 |
ID | Drug resistance | Lineage | Country iso2 | ERR9119669 | HR-TB | None | SRR1169249 | Other | La3 | None | SRR1167384 | Other | lineage4 | None | SRR1180250 | Other | lineage4.9 | None | SRR1169306 | Other | None | SRR1175513 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR3675488 | HR-TB | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | ERR176779 | HR-TB | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | None | ERR181744 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675501 | HR-TB | None | SRR3675222 | Other | None | ERR176643 | HR-TB | None | SRR3675270 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR176751 | HR-TB | None | ERR181887 | HR-TB | None | ERR176651 | HR-TB | None | SRR3675456 | HR-TB | None | ERR212033 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212034 | HR-TB | None | ERR212123 | Other | None | ERR212138 | HR-TB | lineage4 | None | ERR212125 | HR-TB | lineage4 | None | ERR212121 | HR-TB | None | SRR5341313 | HR-TB | None | SRR3675571 | HR-TB | None | SRR5341456 | Other | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341330 | HR-TB | None | SRR6045892 | Sensitive | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6045053 | Other | None | SRR6046225 | HR-TB | None | SRR6046299 | HR-TB | None | ERR294266 | HR-TB | None | ERR4830353 | Other | None | SRR6046594 | HR-TB | lineage4 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6046492 | Other | None | ERR4831117 | HR-TB | None | ERR323045 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | ERR1063857 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063862 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063858 | HR-TB | None | ERR133825 | Sensitive | lineage4 | None | ERR3283010 | Other | La1 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283025 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3283055 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797060 | Other | La1.8.1 | None | ERR3797036 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR387051 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4188247 | HR-TB | None | ERR4769521 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4769450 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR4811493 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR752229 | Other | lineage4.5 | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | ERR6358991 | HR-TB | None | ERR6359045 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736839 | Other | None | ERR736848 | HR-TB | None |
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