Rv3696c - c.1182G>C


Drug resistance types
4 Sensitive 11 RR-TB 72 HR-TB 21 MDR-TB 5 Pre-XDR-TB 0 XDR-TB 108 Other
lineage Counts
lineage Count
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage4.9 67
lineage4.8 4
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.9;lineage6.3 3
lineage2.1 3
lineage2.1;lineage4.9 11
La3;lineage4.9 4
lineage2.1;lineage4.9;lineage6.3 9
lineage1;lineage4.9 1
La1;lineage4.9 1
lineage4.1.2.1 8
La1.7;M.canetti;lineage4.9 3
M.canetti;lineage4.2;lineage4.9 1
lineage2.2 2
lineage4.2;lineage4.6.3;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La1;lineage4.1.2 1
M.canetti;lineage2.1;lineage6.3 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.2;lineage4.8.1;lineage4.9 2
M.canetti;lineage4.9 2
La1.7;lineage4.9 8
10
La1.6;lineage4 1
lineage4.5 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La3;lineage1.1.2 1
lineage2.2.1 6
La1.6;La3;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.3.1;lineage4.9;lineage6 1
lineage4.1.3 2
La3;lineage2 1
lineage4.1.2 1
lineage3 2
lineage2.1;lineage4.9;lineage7 1
lineage4.2;lineage4.9 2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage6.3.1 1
La3;lineage2.1;lineage4.9 2
La2;lineage2.2 1
M.canetti;lineage2.1;lineage4.9 2
lineage2.1;lineage6.3 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La2;lineage4.9 1
lineage4.6.1.1 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage4 3
lineage4.9;lineage6.1.3 1
La1.7.1;La1.7.X-unk4 1
lineage4.3.4.1 1
lineage2.1;lineage4.1.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.1.1.1 1
La1.7.1;lineage4.9 1
La3 1
La1.7 2
La1.8.1 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.9;lineage7 3
lineage2.2.1;lineage4.1.2.1 1
La3;lineage2.2.1 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.4.1.2 1
lineage6.1.3 1
lineage4.6.2.2 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;lineage2.1;lineage6.3 1
lineage4.3.4 1
spoligotype Counts
spoligotype Count
None 221
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR6045555 Other lineage4.9 None
ERR4799025 Other lineage4.8 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR3797070 Other lineage4.9 None
ERR323107 HR-TB lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR3283042 HR-TB lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
ERR2229542 Other lineage4.8 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR4769450 Other lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
SRR5341456 Other lineage4.9 None
ERR108125 RR-TB lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786671 Other None
ERR9786604 Other None
SRR18213713 HR-TB None
SRR28351554 Other La1.6;lineage4 None
ERR4407463 HR-TB None
SRR3675236 Other None
ERR752229 Other lineage4.5 None
ERR6358979 HR-TB lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR2514327 HR-TB lineage4.8 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR3675270 Other lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4817896 HR-TB lineage2.2.1 None
ERR9786569 Other lineage4.8 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR702406 Other lineage2.1 None
ERR387051 RR-TB lineage4.9 None
ERR9119669 MDR-TB lineage4.9 None
SRR1184312 Other lineage2.2.1 None
SRR1173778 Other lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR6045219 HR-TB lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR176778 HR-TB lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR7496472 Other lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR176751 HR-TB lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR19295647 HR-TB lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR6458423 HR-TB lineage2.2.1 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
ERR4818347 Other lineage4.1.2 None
SRR1196546 Other lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR4819422 HR-TB lineage4.9 None
ERR6359082 Other lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811493 HR-TB lineage4.9 None
SRR1184381 MDR-TB None
ERR4810624 MDR-TB lineage2.2 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR9787139 Other lineage6.3.1 None
SRR6045010 Sensitive lineage4.9 None
SRR13423649 Other lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046046 Other lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR1167384 Other La3;lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR6045548 Other lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR6358755 Other lineage4.6.1.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR14782054 Other lineage4.9 None
ERR181887 Other lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR4769521 RR-TB lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR26399490 Sensitive lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
SRR26159043 Other lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR6789621 Other lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR3283032 Other lineage4.9 None
ERR11465801 Other lineage4.3.4.1 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046382 RR-TB lineage2.2.1 None
ERR736875 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR2446566 Other lineage4.9 None
SRR3675221 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675488 Other La1.7;lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
SRR1165699 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR1172728 RR-TB La3 None
ERR4830353 HR-TB La1.7 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283010 Sensitive La1.8.1 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4816656 Other lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR473332 Other lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR3797086 Sensitive lineage4.9 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
SRR3675222 Other La1.7 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR4769452 Other lineage4.9 None
ERR11488822 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR9787165 Other lineage6.1.3 None
ERR9786601 Other lineage4.1.2.1 None
ERR3283018 HR-TB lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR6046594 Other lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
SRR7131023 Other lineage4.1.2.1 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6045053 Other lineage4 None
SRR6789626 Other None
ERR234659 HR-TB None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR25827682 Other None
ERR9787197 Other None
ERR6866807 RR-TB lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR4800341 HR-TB lineage3 None
ERR176651 Other lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
SRR5341330 Other lineage4.9 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR6046878 Other lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR6045242 Other lineage2.1;lineage4.9 None