Rv1221 - c.568T>C
Drug resistance types
3 Sensitive
14 RR-TB
47 HR-TB
18 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
27 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| La1.7.1 | 2 |
| lineage4.1.2 | 1 |
| La1.8.1 | 1 |
| lineage2.2 | 3 |
| La3;lineage4.9 | 8 |
| lineage2.2.1 | 9 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9 | 30 |
| lineage4.9;lineage6.1.3 | 1 |
| La1.7;M.canetti;lineage4.9 | 3 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.7;lineage4.9 | 2 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| lineage4.2;lineage4.9 | 3 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| La1.7;lineage4.2 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1.1 | 3 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage4.5 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| lineage4.9;lineage7 | 3 |
| La1.7;lineage4.9;lineage7 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La2;lineage4.9 | 1 |
| lineage1.1.1 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage1.1.3.1 | 1 |
| 1 | |
| La1.2.BCG | 1 |
| lineage4.3.4.2.1 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 2 |
| lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage2.1 | 1 |
| lineage3 | 1 |
| La3;lineage4 | 1 |
| La1;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 111 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR1791747 | Other | La1.8.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR6046644 | MDR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | SRR6045526 | Other | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR19295647 | HR-TB | lineage4.9 | None | ERR2693257 | HR-TB | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR4828872 | RR-TB | lineage4.2;lineage4.9 | None | ERR294266 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | ERR502510 | HR-TB | lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR1180172 | RR-TB | lineage2.2.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR1183144 | RR-TB | lineage2.2.1 | None | SRR7240492 | MDR-TB | La1.7.1 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR752229 | Other | lineage4.5 | None | ERR6358979 | HR-TB | lineage4.9 | None | ERR4797474 | Other | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR3283031 | Other | La3;lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR387051 | RR-TB | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR2693231 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR2446566 | Other | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | ERR3283014 | Other | La3;lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR14066533 | RR-TB | lineage1.1.1 | None | ERR4797184 | HR-TB | lineage4.9 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | SRR1640750 | RR-TB | None | SRR28351584 | HR-TB | lineage2.2.1 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR6046295 | MDR-TB | lineage4.2;lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | ERR3283024 | HR-TB | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | ERR3797014 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR6046397 | RR-TB | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR3797063 | Other | La3;lineage4.9 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6046382 | RR-TB | lineage2.2.1 | None | SRR3675585 | HR-TB | lineage4.9 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR3283042 | HR-TB | lineage4.9 | None | SRR1180147 | RR-TB | lineage2.2.1.1 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR323041 | MDR-TB | M.canetti;lineage2.1 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR5341330 | Other | lineage4.9 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | ERR2693252 | HR-TB | lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None |
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