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SRA data
Rv0407
- c.861G>C
Drug resistance types
9 Sensitive
3 RR-TB
39 HR-TB
21 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
29 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
29
La3;M.canetti;lineage2.1;lineage4.9
10
M.canetti;lineage2.1;lineage4.9
5
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
3
3
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
2
lineage2.1;lineage4.1.1.1;lineage6.3
2
lineage4.9;lineage7
2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
2
La1.7;lineage4.9
2
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
101
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR038268
HR-TB
La3;M.canetti;lineage4.8;lineage4.9
None
ERR067681
MDR-TB
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
None
ERR067699
Sensitive
La1;lineage2;lineage4.9
None
ERR1023525
HR-TB
La1.7;lineage4.9
None
ERR1035239
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR1063839
MDR-TB
La2;lineage2.2
None
ERR1063846
HR-TB
lineage4.9
None
ERR1063857
MDR-TB
La2;lineage4.9
None
ERR1063896
Sensitive
None
ERR108471
HR-TB
lineage4.9
None
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