Rv0407 - c.861G>C


Drug resistance types
8 Sensitive 3 RR-TB 39 HR-TB 21 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 28 Other
lineage Counts
lineage Count
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.8 1
lineage4.9 27
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1;lineage2;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 3
M.canetti;lineage4.2 1
M.canetti;lineage2.1;lineage4.9 5
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage4.9;lineage7 2
lineage4.3.2;lineage4.9 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage4.9;lineage6.1.3 1
La3;M.canetti;lineage2.1;lineage4.9 10
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4 1
lineage4.3.1;lineage4.9;lineage6 1
lineage4.6.3;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La1.7;lineage4.9 2
lineage2.1;lineage4.3.2;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9 2
M.canetti;lineage2.1;lineage6.3 1
La1;lineage4.9 1
lineage2.2 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
M.canetti;lineage4.6.4;lineage4.9 1
lineage4.5 1
3
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.1.2 1
M.canetti;lineage4.2;lineage4.9 1
La2;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1 1
La3;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
La2;lineage2.2 1
lineage2.2.1;lineage4 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 99
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR4799025 Other lineage4.8 None
SRR11662694 Other lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR14782405 HR-TB lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR6045053 Other lineage4 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR3675267 Other La1.7;lineage4.9 None
SRR14782054 Other lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4769450 Other lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR133825 HR-TB La1;lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR4799513 HR-TB lineage2.2 None
SRR1183111 HR-TB lineage4.9 None
ERR779852 Sensitive lineage4.9 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR323066 Sensitive lineage4.9 None
ERR752229 Other lineage4.5 None
ERR736872 HR-TB lineage4.9 None
ERR1063896 Sensitive None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR9970980 HR-TB lineage4.1.2 None
SRR6046046 Other lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR473332 Other lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR4797264 Sensitive lineage4.9 None
ERR2514692 Other None
ERR212001 HR-TB None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR28119827 Other La3;lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None