lineage | Count |
---|---|
La1.7.X-unk4;lineage4.9 | 1 |
lineage2.1;lineage4.9 | 2 |
lineage4.9 | 28 |
lineage4.1.2.1 | 2 |
La1.7;lineage4.9 | 2 |
lineage4.9;lineage6.1.3 | 1 |
lineage2.2.1.2;lineage7 | 1 |
lineage4.5 | 1 |
lineage2.2.1 | 2 |
lineage2.2 | 4 |
lineage1.2.2.2 | 1 |
lineage4.8.1 | 1 |
lineage4.9;lineage7 | 3 |
M.canetti;lineage2.1;lineage4.9 | 1 |
lineage2.1;lineage4.9;lineage7 | 1 |
lineage2.1;lineage4.9;lineage6.3 | 1 |
lineage4.4.2 | 1 |
lineage4 | 1 |
lineage4.3.1;lineage4.9;lineage6 | 1 |
lineage4.6.3;lineage4.9 | 1 |
lineage4.8 | 1 |
spoligotype | Count |
---|---|
None | 57 |
ID | Drug resistance | Lineage | Country iso2 | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR752229 | Other | lineage4.5 | None | SRR28351584 | HR-TB | lineage2.2.1 | None | ERR3797029 | Other | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | ERR11465604 | HR-TB | lineage4.8.1 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR14782054 | Other | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR161037 | Other | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR473314 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR29231479 | RR-TB | lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6045217 | Sensitive | lineage4.9 | None | SRR26399239 | Sensitive | lineage4.9 | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR387051 | Other | lineage4.9 | None | SRR18511624 | Sensitive | lineage4.4.2 | None | SRR6045053 | Other | lineage4 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR6046492 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR29096203 | Sensitive | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None |
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