EBG00000313339 - n.1052dupG
Drug resistance types
8 Sensitive
1 RR-TB
13 HR-TB
1 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
21 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 2 |
| lineage4.9 | 17 |
| lineage2.2.1 | 6 |
| lineage4.9;lineage7 | 1 |
| lineage2.2 | 3 |
| lineage3 | 2 |
| lineage4.4.2 | 3 |
| lineage4.5 | 1 |
| La1.2 | 1 |
| M.canetti;lineage1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.9.1 | 1 |
| La1;lineage4.9 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 47 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9786276 | Sensitive | lineage4.8 | None | SRR5341330 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR4812763 | Other | lineage2.2.1 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR13423546 | Other | lineage4.4.2 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | ERR752229 | Other | lineage4.5 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | SRR5535933 | Other | lineage4.9 | None | ERR4769427 | Other | La1.2 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | DRR188519 | Other | lineage4.4.2 | None | ERR11466062 | Sensitive | lineage4.9.1 | None | ERR4769452 | Other | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR11466070 | Sensitive | lineage4.3.4.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None |
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