Rv0668 - c.3381C>G
Drug resistance types
23 Sensitive
2 RR-TB
109 HR-TB
15 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
68 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 45 |
| 76 | |
| lineage4 | 11 |
| lineage2.2.1 | 11 |
| lineage4.9.1 | 1 |
| lineage4.1.2.1 | 12 |
| lineage1.1 | 1 |
| lineage4.3.3 | 3 |
| lineage5.2 | 2 |
| lineage4.3.4.1 | 3 |
| lineage3.1 | 2 |
| lineage4.3.4.2.1 | 3 |
| La2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.4.2 | 1 |
| lineage2.2 | 3 |
| lineage4.1.1.3 | 2 |
| lineage4.4.1.1;lineage1.2.2.1 | 1 |
| lineage4.3.4.1;La1.7 | 1 |
| La1.8.1 | 4 |
| lineage1.1.1 | 2 |
| lineage6.1.1 | 2 |
| lineage3 | 7 |
| lineage4;lineage3.1 | 1 |
| lineage3.1.2 | 1 |
| lineage4.3.2 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.5 | 2 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage2.2.2 | 2 |
| lineage2 | 1 |
| lineage4.4.1.1 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4;lineage2.2 | 1 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage4.1 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.8 | 1 |
| lineage4.1.1 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage1.1.2 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 220 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6044838 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6044925 | Sensitive | lineage4.9 | None | SRR6325442 | HR-TB | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045399 | Other | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6325448 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046514 | HR-TB | None | ERR4830353 | Other | None | SRR6325447 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR11466062 | Sensitive | lineage4.9.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR294248 | HR-TB | None | ERR4831117 | HR-TB | None | SRR6831950 | Other | lineage4.3.3 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR5311090 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR323036 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR323038 | HR-TB | None | SRR8217918 | HR-TB | None | ERR323039 | HR-TB | None | SRR7535086 | Other | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323055 | HR-TB | None | ERR323041 | HR-TB | None | ERR323053 | HR-TB | None | ERR323063 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | DRR188519 | Other | lineage4.4.2 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR027293 | Other | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1034652 | Other | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR11466044 | Other | lineage4.1.1.3 | None | ERR3283055 | HR-TB | None | ERR1063857 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR11465714 | Other | lineage4.4.1.1;lineage1.2.2.1 | None | ERR3283021 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR11465511 | Sensitive | lineage4.3.4.2.1 | None | ERR11465802 | Other | lineage4.3.4.1;La1.7 | None | ERR3283017 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797060 | Other | La1.8.1 | None | ERR3797046 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR3797082 | Other | lineage4.9 | None | ERR3797083 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3804037 | Sensitive | lineage1.1.1 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR405209 | Sensitive | lineage4 | None | ERR387051 | HR-TB | None | ERR400529 | Other | lineage3 | None | ERR4769474 | HR-TB | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4188247 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769521 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4796577 | MDR-TB | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4798504 | Other | lineage3 | None | ERR4798431 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4811493 | HR-TB | None | ERR6326069 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR5908228 | Other | lineage4.3.3 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR736835 | HR-TB | None | ERR736865 | HR-TB | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR6358837 | HR-TB | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6866807 | HR-TB | lineage4 | None | ERR736848 | HR-TB | None | ERR752229 | Other | lineage4.5 | None | SRR21732954 | Sensitive | lineage4.9 | None | ERR8976043 | HR-TB | None | ERR9119669 | HR-TB | None | ERR9119096 | Other | lineage4.3.3 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9786018 | Sensitive | lineage1.1.1 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987722 | HR-TB | None | ERR9896147 | Sensitive | lineage2.2.1 | None | SRR069981 | HR-TB | lineage2.2.2 | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | SRR069989 | HR-TB | lineage2 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1174897 | HR-TB | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR13423544 | Other | lineage4.5 | None | SRR13837579 | HR-TB | lineage4.9 | None | SRR13837703 | Sensitive | lineage4.9 | None | SRR13861288 | Other | lineage4.9 | None | SRR13861241 | HR-TB | lineage4.9 | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR13861305 | Other | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR13861326 | Other | lineage4.9 | None | SRR13861372 | Other | lineage4.9 | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR13861381 | MDR-TB | lineage4.9 | None | SRR13861434 | RR-TB | lineage4.9 | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR13861699 | Sensitive | lineage4.9 | None | SRR13861510 | Other | lineage4.9 | None | SRR13861646 | Other | lineage4.9 | None | SRR13861666 | Sensitive | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR1640750 | HR-TB | None | SRR17658565 | Other | lineage3 | None | SRR1791696 | Other | La1.8.1 | None | SRR17832802 | HR-TB | lineage3 | None | SRR20632814 | Sensitive | lineage4 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR8692905 | HR-TB | None | SRR20970016 | Other | lineage2.2 | None | ERR11082350 | MDR-TB | lineage4.6.2.2 | None | SRR8692898 | Other | lineage4.9 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR8692807 | Other | lineage4.9 | None | SRR8692825 | Other | lineage4.9 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR8692882 | HR-TB | lineage4.9 | None | SRR8692887 | Other | None | SRR8692894 | Other | lineage4.9 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR6325445 | HR-TB | None | SRR3675488 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | ERR4815471 | Other | lineage4.9 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675501 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675222 | Other | None | ERR176740 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675383 | HR-TB | None | SRR3675456 | HR-TB | None | ERR4816151 | Other | lineage4.8 | None | SRR3675510 | Other | None | SRR3675545 | HR-TB | None | ERR4816964 | Other | lineage4.9 | None | SRR3675555 | HR-TB | None | SRR3675558 | HR-TB | None | SRR3675589 | Sensitive | lineage4 | None | ERR4816470 | Other | lineage3 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR4816656 | HR-TB | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | SRR7898221 | MDR-TB | lineage1.1.2 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR4819933 | Other | lineage4.9 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR4819357 | Other | lineage4.9 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR4818929 | HR-TB | None | ERR2509673 | Other | lineage2.2.1 | None | SRR5007185 | HR-TB | lineage4.9 | None | ERR1035138 | MDR-TB | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR5341470 | HR-TB | None | ERR2693239 | HR-TB | None | ERR4821053 | Other | lineage3 | None | SRR6046210 | Other | lineage4 | None | SRR6045519 | HR-TB | None | ERR278594 | HR-TB | None |
|---|
