Rv0668 - c.3381C>G


Drug resistance types
28 Sensitive 31 RR-TB 60 HR-TB 93 MDR-TB 4 Pre-XDR-TB 0 XDR-TB 68 Other
lineage Counts
lineage Count
lineage4.1.2.1 11
lineage4.9;lineage7 4
lineage2.2.1 10
lineage2.1;lineage4.9 7
M.canetti;lineage2.1;lineage4.9 24
M.canetti;lineage2.1;lineage4 1
lineage4.9 71
La3;M.canetti;lineage2.1;lineage4.9 12
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.1.1.3 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 5
La1.7;lineage4.9 8
lineage4.6.1.1 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
La1.7;M.canetti;lineage4.9 5
La1.7;lineage3.1;lineage4 1
lineage6.1.1 2
lineage5.2 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage4.3.2;lineage4.9 1
lineage2.2.1.2;lineage7 1
M.canetti;lineage2.1;lineage4.1.2.1 1
La2;lineage4.9;lineage9 1
lineage1.2.2.1;lineage4.4.1.1 1
La2;lineage4.9 2
lineage4 1
lineage4.5 2
lineage4.2;lineage4.6.3;lineage4.9.1 2
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.4.1.2 1
lineage2.1;lineage4.3.2 1
lineage1.1.1 2
La1.7 2
M.canetti;lineage2.1 1
lineage4.9;lineage9 3
lineage4.3.4.1 3
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage4.3.4.2.1 3
La1.8.1 4
lineage1.2.1.2.1 1
lineage2.1;lineage2.2;lineage6.3 1
lineage4.3.3 2
lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1 1
La1.7.1 1
La3;M.canetti;lineage3.1 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage2.2 2
lineage4.4.2 1
M.canetti;lineage4.9;lineage9 1
4
lineage3 7
lineage4.4.1.1 1
lineage2.1;lineage4.9;lineage7 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.2;lineage4.6.3;lineage4.9 1
La3;lineage4.9 1
La2;M.canetti 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La2;lineage2.2 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.9 4
lineage1.1.2;lineage4 1
La1.7;lineage4.3.4.1 1
lineage3.1.2.2 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
M.canetti;lineage2.1;lineage3 1
lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.8;lineage4.9 1
La3;M.canetti;lineage4.9 2
La1.7.X-unk4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage3.1 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.6.3;lineage4.9 2
lineage4.8 1
M.canetti;lineage2.2 1
M.canetti 1
lineage1.1.2 2
M.canetti;lineage4.3.1;lineage4.9 1
M.canetti;lineage1 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.1.2.1.1 1
lineage4.9.1 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
La1.2.BCG 1
lineage4.6.2.2 1
lineage3.1.2.1;lineage3.1.2.2 1
spoligotype Counts
spoligotype Count
None 284
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1165506 Other lineage4.1.2.1 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
SRR12142339 HR-TB lineage2.2.1 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR13423649 Other lineage2.2.1 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR4816964 HR-TB lineage4.9 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR1162740 Other lineage4.1.2.1 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
ERR11466044 Other lineage4.1.1.3 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
SRR3675269 RR-TB lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311089 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
ERR926160 Sensitive lineage4.9 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR3675461 RR-TB lineage4.9 None
ERR3799304 RR-TB lineage6.1.1 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
SRR5709967 MDR-TB lineage2.2.1 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR2229143 RR-TB lineage4.9 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR4769474 HR-TB lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR11465714 Other lineage1.2.2.1;lineage4.4.1.1 None
ERR4819877 HR-TB lineage4.9 None
ERR323039 MDR-TB La2;lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR13423544 Other lineage4.5 None
ERR926154 Sensitive lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR926164 Other lineage4.9 None
SRR6044815 RR-TB lineage4.9 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR14782405 HR-TB lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR9119500 MDR-TB lineage5.2 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1162864 MDR-TB lineage4.1.2.1 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR9786018 Sensitive lineage1.1.1 None
SRR3675222 Other La1.7 None
SRR3675488 Other La1.7;lineage4.9 None
SRR3675494 RR-TB lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
ERR3804037 Sensitive lineage1.1.1 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR4188350 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2509673 Other lineage2.2.1 None
ERR11465511 Other lineage4.3.4.2.1 None
ERR3797060 Other La1.8.1 None
SRR1510066 RR-TB lineage1.2.1.2.1 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR5908228 RR-TB lineage4.3.3 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR7240492 MDR-TB La1.7.1 None
SRR13861326 Other lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR1165584 Other lineage4.1.2.1 None
ERR4811493 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR9119096 RR-TB lineage4.3.3 None
SRR20970016 Other lineage2.2 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
DRR188519 Other lineage4.4.2 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR13861241 HR-TB lineage4.9 None
SRR28351488 MDR-TB lineage2.2.1 None
ERR987722 MDR-TB None
SRR28044873 Pre-XDR-TB lineage3 None
SRR1173453 Other lineage4.4.1.1 None
ERR926165 Sensitive lineage4.9 None
SRR3675243 Other lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR6046382 Sensitive lineage2.2.1 None
SRR1640750 Other None
SRR17832802 HR-TB lineage3 None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR3275196 Other lineage2.2.1 nl
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR6866807 Other lineage4.9 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR266126 Sensitive La2;M.canetti None
ERR926155 Sensitive lineage4.9 None
ERR4796577 HR-TB None
ERR4819241 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR4818929 HR-TB lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675441 RR-TB lineage4.9 None
SRR3675507 RR-TB lineage4.9 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1167055 Other lineage4.1.2.1 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR3675482 Other lineage4.9 None
ERR3797083 RR-TB lineage4.9 None
ERR4821053 RR-TB lineage3 None
ERR4798504 RR-TB lineage3 None
SRR20969708 HR-TB lineage2.2 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR3675495 Other lineage2.1;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR3675487 MDR-TB M.canetti;lineage4.9 None
ERR736848 Other lineage4.9 None
SRR1791696 RR-TB La1.8.1 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4830353 Other La1.7 None
ERR9119669 MDR-TB lineage4.9 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR14782054 Other lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR4769521 RR-TB lineage4.9 None
ERR4817692 HR-TB lineage1.1.2;lineage4 None
ERR11465802 Other La1.7;lineage4.3.4.1 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR6359069 Sensitive lineage4.9 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR3675280 RR-TB lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR4816656 Other lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
ERR11465353 Sensitive lineage4.3.4.1 None
SAMN02414850 Other lineage4.1.2.1 None
SRR3675312 Sensitive lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR6359082 Other lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
SRR28868381 Other lineage4.9 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR6326069 Pre-XDR-TB lineage4.3.4.1 None
SRR29096410 Other lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR3797023 HR-TB La1.8.1 None
ERR926157 Sensitive lineage4.9 None
SRR13861288 Other lineage4.9 None
SRR13861510 Other lineage4.9 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR400529 Other lineage3 None
ERR752229 Other lineage4.5 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR5162090 RR-TB lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR3283055 HR-TB lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR926156 Other lineage4.9 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR2693228 RR-TB lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR26159047 RR-TB lineage4.6.3;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR387051 RR-TB lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4799025 Other lineage4.8 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR266120 Other M.canetti None
ERR3468544 Other lineage2.1;lineage4.9 None
SRR7898221 MDR-TB lineage1.1.2 None
ERR926158 Sensitive lineage4.9 None
ERR4797588 MDR-TB lineage3 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR4816551 MDR-TB lineage4.1.1.3 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR926163 Other lineage4.9 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1183111 HR-TB lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR8665994 RR-TB lineage4.9 None
ERR971389 Sensitive lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3797047 MDR-TB lineage4.9 None
ERR11466062 Sensitive lineage4.9.1 None
SRR7240215 Other La1.8.1 None
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
SRR1165423 RR-TB lineage4.1.2.1 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR21732954 Sensitive lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1915487 Other La1.2.BCG None
ERR4800527 MDR-TB lineage2.2.1 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
SRR7535086 Other None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR11082350 MDR-TB lineage4.6.2.2 None
ERR245675 Sensitive lineage1.1.2 None
ERR3468607 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR9787014 Other lineage6.1.1 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None