Rv0005 - c.888G>T
Drug resistance types
33 Sensitive
2 RR-TB
29 HR-TB
2 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
15 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 1 |
| lineage2.2.1 | 5 |
| lineage3.1.2 | 1 |
| 22 | |
| lineage4.9 | 5 |
| lineage4 | 33 |
| lineage4.5 | 3 |
| lineage1.1.3.1 | 1 |
| lineage4.8 | 2 |
| lineage2.2 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage2.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage1.1.2 | 1 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.1 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.8.1 | 1 |
| La2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 84 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4798504 | Other | lineage3 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR6358991 | HR-TB | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR752229 | Other | lineage4.5 | None | ERR736865 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR10809074 | Sensitive | lineage4 | None | ERR987722 | HR-TB | None | SRR11444301 | Sensitive | lineage4.8 | None | SRR1172310 | HR-TB | None | SRR1158918 | Sensitive | lineage4 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1174897 | HR-TB | None | SRR15315794 | HR-TB | lineage4.5 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR21277255 | HR-TB | lineage4.5 | None | SRR18912067 | Sensitive | None | ERR4814639 | HR-TB | lineage4 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675246 | Sensitive | lineage4 | None | ERR176740 | HR-TB | None | ERR176751 | HR-TB | None | ERR212121 | HR-TB | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR5341387 | Other | lineage4 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4819051 | Other | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341469 | Other | lineage4 | None | SRR5341470 | HR-TB | None | ERR4831117 | HR-TB | None | SRR6045010 | Other | lineage4 | None | ERR323037 | HR-TB | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6045892 | Sensitive | None | SRR6046385 | Other | lineage4.9 | None | SRR6511621 | HR-TB | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4972533 | MDR-TB | lineage4.1.2.1.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6964513 | Sensitive | lineage4.1.2.1 | None | ERR323039 | HR-TB | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR502524 | HR-TB | La2 | None | SRR7535082 | Sensitive | lineage4 | None | ERR323053 | HR-TB | None | ERR3283055 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR108471 | HR-TB | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR3445501 | HR-TB | None | ERR3445504 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797046 | HR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None |
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