Rv0005 - c.888G>T


Drug resistance types
19 Sensitive 1 RR-TB 19 HR-TB 3 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 7 Other
lineage Counts
lineage Count
lineage4.9 32
lineage2.2 1
lineage4.8 1
lineage2.2.1 3
lineage4.9;lineage9 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.3.2;lineage4.9 1
lineage4.5 1
La2;lineage4.9 1
lineage4.1.2.1 1
lineage4.9;lineage6.3 2
lineage1.1.3.1 1
La1.5;lineage4.5 2
2
lineage1.1.2 1
La2;lineage4.9;lineage9 1
spoligotype Counts
spoligotype Count
None 52
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR7535082 Sensitive lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR502511 Sensitive lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
ERR4817667 HR-TB lineage4.8 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341300 HR-TB lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR5341366 Sensitive lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
SRR5341303 Sensitive lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR779852 Sensitive lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
ERR736831 Other lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR752229 Other lineage4.5 None
ERR323039 HR-TB La2;lineage4.9 None
ERR702405 Sensitive lineage4.9 None
ERR13285068 Sensitive lineage4.9 None
SRR6964513 Sensitive lineage4.1.2.1 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR751326 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR5341467 Other lineage4.9 None
ERR736834 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR15315794 HR-TB La1.5;lineage4.5 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR1158918 Sensitive lineage4.9 None
ERR137286 Other lineage4.9 None
ERR323066 Sensitive lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR1063896 Sensitive None
SRR1159378 Other lineage4.9 None
SRR5341310 Other lineage1.1.2 None
ERR502510 Sensitive lineage4.9 None
SRR21277255 HR-TB La1.5;lineage4.5 None
ERR4814639 HR-TB lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR323085 Sensitive lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
ERR987722 MDR-TB None
SRR1180226 HR-TB lineage4.9 None