Rv0006 - c.1056G>A
Drug resistance types
9 Sensitive
1 RR-TB
14 HR-TB
7 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
28 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 22 |
| lineage4.1.2.1 | 6 |
| lineage4.5 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| M.canetti;lineage4.9 | 1 |
| lineage2.1 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage2.2.1 | 4 |
| lineage4.4.1.1 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage6.1.3 | 1 |
| lineage6.3.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage4.1.1.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| 3 | |
| lineage4.6.1.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage1.1.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.6.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 60 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341299 | HR-TB | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR702406 | Other | lineage2.1 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4.9 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR9787165 | Other | lineage6.1.3 | None | ERR137286 | Other | lineage4.9 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR9786617 | Other | lineage4.1.1.1 | None | ERR751326 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR3804155 | Other | lineage4.1.2.1 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR9786671 | Other | None | ERR9786604 | Other | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR6358755 | Other | lineage4.6.1.1 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR1063896 | Sensitive | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR1159378 | Other | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675461 | RR-TB | lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR9786645 | Other | lineage4.6.2.2 | None |
|---|
