Rv0006 - c.1548C>G


Drug resistance types
27 Sensitive 1 RR-TB 20 HR-TB 2 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 21 Other
lineage Counts
lineage Count
lineage4.4.1.1.1 1
lineage4.9 48
lineage4.5 1
La3;lineage2.1;lineage4.9 1
lineage1.1.1.1 2
La1;lineage2;lineage4.9 1
lineage4.2.1 1
2
lineage2.2 1
lineage4.3.1;lineage4.9;lineage6 1
La1.7;M.canetti;lineage4.9 2
La3;lineage4.9 3
La1;lineage4.9 2
lineage4.1;lineage4.8 1
lineage4.9;lineage6.1.3 1
lineage4 2
lineage1.1.1 1
M.canetti;lineage4.9 1
lineage4.9;lineage7 1
spoligotype Counts
spoligotype Count
None 73
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR2693252 Sensitive lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR926157 Sensitive lineage4.9 None
ERR752229 Other lineage4.5 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR473323 HR-TB lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
SRR29050789 Sensitive lineage1.1.1.1 None
ERR926158 Sensitive lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR4596910 Sensitive lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR926164 Other lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
ERR926165 Sensitive lineage4.9 None
ERR4796577 HR-TB None
ERR4816762 Sensitive lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR926162 Sensitive lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR4814639 HR-TB lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR323037 Other lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR4828356 Sensitive lineage1.1.1.1 vn
ERR779852 Sensitive lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
ERR736831 Other lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR1167384 Other La3;lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR4798823 HR-TB lineage4 None
ERR4819314 Other lineage1.1.1 None
SRR1175052 HR-TB lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
ERR736848 Other lineage4.9 None
ERR926160 Sensitive lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
SRR7496471 Sensitive lineage4 None
SRR6044876 Sensitive lineage4.9 None
ERR485006 HR-TB lineage4.9 None
ERR926163 Other lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR4811493 HR-TB lineage4.9 None
ERR9786843 Other None
ERR926156 Sensitive lineage4.9 None
SRR19295647 Sensitive lineage4.9 None