Rv2245 - c.570C>G
Drug resistance types
45 Sensitive
4 RR-TB
92 HR-TB
20 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
124 Other
lineage Counts
| lineage | Count |
|---|---|
| 130 | |
| lineage4.9 | 19 |
| lineage4 | 42 |
| lineage2.2.1 | 18 |
| lineage2.2 | 7 |
| lineage5.2 | 2 |
| lineage4.6.2.2 | 3 |
| lineage4.1 | 3 |
| La2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.8 | 4 |
| lineage4.3.2.1 | 1 |
| lineage4.1.2.1 | 12 |
| lineage6.1.1 | 2 |
| lineage4.1.3 | 2 |
| lineage2 | 3 |
| La1.3 | 1 |
| La1.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage3.1.2 | 1 |
| lineage3 | 5 |
| lineage4.6.1.1 | 1 |
| lineage4.8;lineage4.1 | 2 |
| lineage4.5 | 2 |
| lineage4.3.2 | 1 |
| lineage4.3.4.1;lineage4.3.3 | 1 |
| lineage4.1.1 | 2 |
| lineage6 | 1 |
| lineage6.3.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.3.3 | 3 |
| lineage2.2.1.1 | 2 |
| lineage3.1 | 2 |
| lineage1.2.1.2 | 1 |
| lineage4.3 | 1 |
| La1.8.1 | 4 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage2.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.8;La3 | 1 |
| lineage4.1;lineage1 | 1 |
| lineage4.9;lineage3.1.2.1 | 1 |
| lineage4.9;lineage2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 295 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045892 | Sensitive | None | SRR6046152 | Other | lineage4.9 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6044855 | Other | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044890 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6046066 | HR-TB | None | SRR6045010 | Other | lineage4 | None | SRR6045053 | Other | None | SRR6046046 | Other | None | SRR6045399 | Other | None | SRR6046305 | Other | lineage4.9 | None | ERR502510 | Sensitive | lineage4 | None | SRR6046299 | HR-TB | None | SRR6046362 | HR-TB | None | ERR4830353 | Other | None | SRR6046540 | HR-TB | None | SRR6511621 | HR-TB | None | SRR6046397 | Other | None | SRR6046460 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4831117 | HR-TB | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR502532 | HR-TB | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6789626 | Other | None | ERR294266 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7496509 | Other | None | SRR7535082 | Sensitive | lineage4 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR7535086 | Other | None | SRR7585435 | Other | lineage4.9 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR1035157 | Other | lineage4.9 | None | ERR323039 | HR-TB | None | ERR323053 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR323043 | HR-TB | None | ERR323085 | Sensitive | lineage4 | None | ERR1034652 | Other | None | ERR1063883 | Sensitive | lineage4 | None | ERR108471 | HR-TB | lineage4 | None | ERR1063896 | Sensitive | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR11049020 | Other | lineage4.8 | None | ERR137286 | Sensitive | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283024 | Other | None | ERR3283008 | Other | lineage4.9 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283032 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283043 | Other | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None | ERR3797014 | Other | None | ERR3283055 | HR-TB | None | ERR363446 | Sensitive | lineage4 | None | ERR3445504 | HR-TB | None | ERR3797044 | Other | None | ERR3797017 | Other | None | ERR3797046 | HR-TB | None | ERR3797061 | Other | None | ERR4769452 | HR-TB | None | ERR3797069 | Other | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR4024991 | Other | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4407463 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4797264 | Sensitive | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798099 | Other | None | ERR4797474 | Other | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4800341 | Other | lineage3 | None | ERR4810741 | HR-TB | None | ERR4811493 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR5336148 | Other | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6866639 | Other | None | ERR6358979 | Other | None | ERR6358991 | HR-TB | None | ERR6866022 | Other | None | ERR6866410 | Sensitive | None | ERR736839 | Other | None | ERR702406 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR736865 | HR-TB | None | ERR736874 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR736867 | HR-TB | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR752229 | Other | lineage4.5 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR751326 | Sensitive | lineage4 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786440 | Other | lineage4.1 | None | ERR9786515 | Other | lineage4.1.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786508 | Sensitive | lineage4.3.4.1;lineage4.3.3 | None | ERR9786604 | Other | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9786843 | Other | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9787165 | Other | lineage6 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR1172728 | MDR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR990545 | Other | lineage3 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1172234 | Other | None | ERR9787197 | Other | None | ERR9896144 | Other | lineage3 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1169194 | Other | None | SRR1172310 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1172817 | HR-TB | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173153 | HR-TB | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173363 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1173788 | Other | None | SRR1173400 | Other | None | SRR1173484 | Other | lineage4 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173778 | Other | None | SRR1173629 | Other | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1174897 | HR-TB | None | SRR1175074 | MDR-TB | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1184294 | HR-TB | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184380 | HR-TB | None | SRR1184381 | MDR-TB | None | SRR1184372 | MDR-TB | None | SRR1184388 | Other | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196546 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR1196768 | MDR-TB | None | SRR1196566 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196677 | HR-TB | lineage2 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR12416824 | HR-TB | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR12142341 | HR-TB | None | ERR11050526 | Sensitive | lineage4.3 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR19303884 | HR-TB | None | SRR14801749 | Sensitive | None | SRR15368973 | Other | None | SRR1791725 | Other | La1.8.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR17658565 | Other | lineage3 | None | SRR18910194 | HR-TB | lineage2.2 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR4815604 | HR-TB | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | ERR11081258 | Other | lineage4.8 | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675465 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675488 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675222 | Other | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675234 | Other | None | SRR3675311 | Other | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675501 | HR-TB | None | ERR176549 | Other | lineage4.3.4.2.1 | None | SRR3675270 | HR-TB | None | ERR176740 | HR-TB | None | ERR4817060 | RR-TB | None | ERR176751 | HR-TB | None | ERR4816999 | Other | None | ERR2027263 | Other | lineage4 | None | ERR4816585 | Other | lineage2.2 | None | SRR3675572 | Other | None | SRR5341384 | Sensitive | lineage4.9 | None | SRR3742665 | HR-TB | None | ERR212121 | HR-TB | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR502912 | Other | lineage2.2.1 | None | ERR4818021 | Other | La1.8.1 | None | SRR7496472 | Other | None | ERR4819068 | Sensitive | lineage4.1;lineage1 | None | SRR5341453 | Sensitive | None | ERR234659 | HR-TB | None | ERR2446566 | Other | lineage4.1 | None | SRR5341396 | Other | lineage4 | None | ERR4818615 | Other | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341456 | Other | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR5341425 | Other | lineage4 | None | ERR1035138 | MDR-TB | None | ERR2514390 | Sensitive | lineage4.9;lineage3.1.2.1 | None | ERR2514535 | Sensitive | lineage3 | gb | SRR5341455 | Sensitive | lineage4 | None | SRR5431730 | Other | La1.8.1 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341333 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2693231 | Other | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341302 | HR-TB | None | ERR6359082 | Other | lineage4.9 | None | SRR5341469 | Other | lineage4 | None | SRR5341470 | HR-TB | None | ERR2693254 | Other | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR2693230 | Other | None | SRR6045519 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | ERR2693257 | Other | None | SRR5535933 | HR-TB | None |
|---|
