Rv2245 - c.492G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
32 Sensitive
5 RR-TB
39 HR-TB
12 MDR-TB
3 Pre-XDR-TB
2 XDR-TB
67 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage2.2 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.9 | 71 |
| lineage4.8 | 2 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.7;lineage4.9 | 5 |
| La3;lineage4 | 1 |
| lineage4 | 2 |
| lineage4.6.3;lineage4.9 | 3 |
| lineage2.2.1 | 6 |
| lineage4.3.4.1 | 1 |
| La1.7 | 1 |
| La3;lineage4.9 | 8 |
| lineage4.4.2 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.5 | 1 |
| lineage3 | 3 |
| lineage6.1.1 | 2 |
| lineage4.1.2.1 | 3 |
| 3 | |
| lineage4.6.2.2 | 2 |
| M.canetti;lineage4.9 | 3 |
| lineage2.2 | 2 |
| La1.2 | 1 |
| lineage4.2;lineage4.9 | 2 |
| La1.7;M.canetti;lineage4.9 | 1 |
| La1.6;lineage4 | 1 |
| lineage4.3.4.2 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La2;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage3.1.2.2 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage3.1.2.1 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| La1;lineage4.9 | 2 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage3.1.2.1;lineage4 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.3.4 | 1 |
| M.canetti;lineage1 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.1.2 | 1 |
| lineage6.1.3 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 160 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR2229733 | Other | lineage4.8 | dk | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | SRR5535933 | Other | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR11466070 | Sensitive | lineage4.3.4.1 | None | ERR4830353 | Other | La1.7 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | SRR5341330 | Other | lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR752229 | Other | lineage4.5 | None | ERR4798504 | RR-TB | lineage3 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR12006550 | Sensitive | None | ERR176779 | HR-TB | lineage4.9 | None | SRR29096717 | Sensitive | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR3675441 | Other | lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR26331611 | Sensitive | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR29097054 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR23961549 | Other | La1.2 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR9786843 | Other | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR28351554 | Sensitive | La1.6;lineage4 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR9613554 | MDR-TB | lineage4.3.4.2 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR6046046 | Other | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR29050859 | Other | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR9896144 | Other | lineage3 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1 | None | ERR212138 | HR-TB | lineage4.9 | None | SRR29096387 | Sensitive | M.canetti;lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR29096150 | Other | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | SRR29096246 | Sensitive | La1.7;lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR987722 | MDR-TB | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR28351455 | Other | lineage3.1.2.1;lineage4 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR29096410 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR926157 | Sensitive | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | SRR26399239 | Sensitive | lineage4.9 | None | ERR11252736 | Other | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR1183049 | RR-TB | lineage2.2 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR13265708 | Sensitive | lineage2.2.1 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR9786525 | Other | lineage4 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR23961542 | Other | La1;lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR1023236 | Other | lineage6.1.3 | None | SRR29097026 | Other | lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None |
|---|
