lineage | Count |
---|---|
lineage4.9;lineage7 | 4 |
M.canetti;lineage4.9 | 2 |
lineage4.9 | 11 |
La1.7;lineage4.9 | 2 |
lineage2.1;lineage4.9;lineage7 | 1 |
lineage2.2.1 | 2 |
lineage2.2.1.2;lineage7 | 1 |
lineage4.3.1;lineage4.9;lineage6 | 1 |
lineage3 | 1 |
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
La3;lineage4.9 | 1 |
lineage4.5 | 1 |
lineage1.2.2.2 | 1 |
lineage2.1;lineage4.9 | 1 |
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
La1;lineage4.9 | 1 |
lineage4.9;lineage6.1.3 | 1 |
lineage4.6.3;lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 34 |
ID | Drug resistance | Lineage | Country iso2 | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | SRR5341330 | Other | lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR3283021 | HR-TB | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR28119827 | Other | La3;lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR387051 | Other | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR161037 | Other | lineage4.9 | None | SRR3675582 | Other | lineage4.9 | None |
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