EBG00000313339 - n.1061delA
Drug resistance types
7 Sensitive
1 RR-TB
10 HR-TB
0 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
20 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 15 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.6.1.1 | 3 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage2.2.1 | 5 |
| lineage4.3.4.1 | 1 |
| La1.2;La1.8.1 | 1 |
| La2 | 2 |
| lineage1.2.2.2 | 1 |
| lineage2.2 | 2 |
| lineage4.8 | 1 |
| lineage4.9.1 | 1 |
| lineage3 | 1 |
| La1;lineage4.9 | 1 |
| La1.8.1 | 1 |
| lineage4.5 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| La1.2 | 1 |
| lineage4.9;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 42 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3283055 | HR-TB | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | SRR6044875 | Sensitive | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR11466070 | Sensitive | lineage4.3.4.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR6046492 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR13888750 | Other | La2 | None | SRR13888750 | Other | La2 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR4769452 | Other | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR4769450 | Other | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR11466062 | Sensitive | lineage4.9.1 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR26331611 | Sensitive | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR5431730 | Other | La1.8.1 | None | ERR752229 | Other | lineage4.5 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR4769427 | Other | La1.2 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR5341330 | Other | lineage4.9 | None | ERR4769457 | Other | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None |
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