Rv0006 - c.-560A>G
Drug resistance types
42 Sensitive
4 RR-TB
139 HR-TB
16 MDR-TB
12 Pre-XDR-TB
0 XDR-TB
94 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.2.1 | 2 |
| 120 | |
| lineage4.1 | 2 |
| lineage4.1.1 | 1 |
| lineage2.2.1 | 14 |
| lineage2.1 | 3 |
| lineage4.9 | 69 |
| lineage4 | 25 |
| lineage3 | 3 |
| lineage2.2 | 5 |
| lineage4.8;La3 | 1 |
| La1.8.1 | 4 |
| lineage4.2.2.2 | 1 |
| lineage4;lineage1.1 | 1 |
| lineage4.7 | 2 |
| lineage4.1.2.1 | 10 |
| lineage4.2.1 | 1 |
| lineage3.1 | 4 |
| lineage2.2.1.1 | 1 |
| lineage4.6.4 | 2 |
| lineage4.8.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.6.1.1 | 3 |
| La1 | 2 |
| lineage4.1.3 | 2 |
| La1.2 | 1 |
| lineage4.9;La1.3 | 1 |
| lineage2 | 4 |
| lineage1.2.2.2 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.3.3 | 4 |
| lineage4.3.2 | 2 |
| lineage4.5 | 2 |
| lineage1.1.2 | 1 |
| lineage4.8 | 2 |
| lineage4.6.2.2 | 1 |
| lineage6.3.1 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage1.1.1 | 1 |
| La1.4 | 1 |
| La1.7.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 307 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR4815604 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675465 | HR-TB | None | ERR1035239 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675311 | Other | None | SRR3416776 | Other | lineage2.1 | None | SRR3675221 | HR-TB | None | ERR4815471 | Other | lineage4.9 | None | SRR3675270 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675456 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR4815752 | Other | lineage4.9 | None | ERR4816999 | Other | None | ERR4816964 | Other | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR212001 | HR-TB | None | SRR3675545 | HR-TB | None | SRR3675555 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR4817060 | RR-TB | None | ERR212034 | HR-TB | None | SRR3675558 | HR-TB | None | ERR4816466 | HR-TB | None | ERR4816470 | Other | lineage3 | None | SRR3675572 | Other | None | ERR212138 | HR-TB | lineage4 | None | ERR2446566 | Other | lineage4.1 | None | SRR3742665 | HR-TB | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR7496472 | Other | None | ERR4816585 | Other | lineage2.2 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4818021 | Other | La1.8.1 | None | ERR4818615 | Other | None | ERR234659 | HR-TB | None | ERR2513470 | Other | lineage4.2.2.2 | None | SRR5341456 | Other | None | SRR5341373 | HR-TB | lineage4 | None | ERR4819280 | Sensitive | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341333 | HR-TB | None | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR4819357 | Other | lineage4.9 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5266542 | Pre-XDR-TB | lineage2.2.1 | ru | ERR4819781 | Other | lineage2.2.1 | None | SRR5341293 | HR-TB | lineage4 | None | ERR4819933 | Other | lineage4.9 | None | ERR1035138 | MDR-TB | None | SRR5341302 | HR-TB | None | SRR5341313 | HR-TB | None | ERR4819932 | Other | lineage4.7 | None | SRR5341330 | HR-TB | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5535933 | HR-TB | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR6045519 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6046141 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044855 | Other | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045053 | Other | None | SRR6045952 | HR-TB | None | SRR6045205 | Sensitive | lineage4.9 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046046 | Other | None | SRR6045320 | Other | lineage4.9 | None | SRR6046066 | HR-TB | None | SRR6046492 | Other | None | SRR6046299 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6785262 | Sensitive | lineage4.2.1 | None | SRR6046540 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR4831117 | HR-TB | None | SRR6785227 | Other | lineage2.2.1 | None | SRR6046514 | HR-TB | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR323037 | HR-TB | lineage4 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4872102 | MDR-TB | lineage4.6.4 | None | ERR294248 | HR-TB | None | SRR6785527 | Sensitive | lineage2.2.1 | None | SRR6789626 | Other | None | ERR323038 | HR-TB | None | ERR502532 | HR-TB | None | ERR323036 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311081 | HR-TB | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR7496509 | Other | None | SRR8217918 | HR-TB | None | SRR7496517 | Other | None | ERR323043 | HR-TB | None | SRR7535086 | Other | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR323055 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063855 | Other | lineage4 | None | ERR1063857 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR108471 | HR-TB | lineage4 | None | ERR3283010 | Other | La1 | None | ERR3283027 | HR-TB | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283021 | HR-TB | None | ERR3283043 | Other | lineage4.9 | None | ERR3283036 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445501 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3797071 | Other | lineage4.9 | None | ERR3468544 | HR-TB | None | ERR3797046 | HR-TB | None | ERR5336148 | Other | None | ERR3797016 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797069 | Other | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR3797083 | HR-TB | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR387051 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4188247 | HR-TB | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR4407463 | HR-TB | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769521 | HR-TB | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769452 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4796577 | MDR-TB | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4798262 | HR-TB | La1 | None | ERR4800341 | Other | lineage3 | None | ERR6359066 | HR-TB | lineage4 | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811493 | HR-TB | None | ERR6358837 | HR-TB | None | ERR6358951 | HR-TB | lineage4 | None | ERR4810741 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR5908228 | Other | lineage4.3.3 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6866807 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR702406 | HR-TB | None | ERR736835 | HR-TB | None | ERR736837 | Other | lineage4.9 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR736867 | HR-TB | None | ERR736848 | HR-TB | None | ERR736874 | HR-TB | None | ERR752229 | Other | lineage4.5 | None | ERR8976043 | HR-TB | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9117709 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9119096 | Other | lineage4.3.3 | None | ERR9786604 | Other | None | ERR9119508 | MDR-TB | lineage4.6.4 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR9787197 | Other | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1172234 | Other | None | SRR1169194 | Other | None | SRR1173363 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1172728 | MDR-TB | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172817 | HR-TB | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173153 | HR-TB | None | SRR1173400 | Other | None | SRR1173384 | Other | lineage4 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173778 | Other | None | SRR1173629 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1173788 | Other | None | SRR1175074 | MDR-TB | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175049 | RR-TB | None | SRR1175090 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184294 | HR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184388 | Other | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184372 | MDR-TB | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1196566 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196677 | HR-TB | lineage2 | None | SRR12142341 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR1791696 | Other | La1.8.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR15368973 | Other | None | SRR16156775 | Other | lineage4.9 | None | SRR12416824 | HR-TB | None | SRR16278274 | Other | La1.4 | None | SRR1710057 | Other | lineage2.1 | None | SRR19304036 | HR-TB | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | SRR20632814 | Sensitive | lineage4 | None | SRR20969677 | HR-TB | lineage2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR21677886 | Sensitive | lineage4.9 | None |
|---|
