Rv0006 - c.-560A>G


Drug resistance types
42 Sensitive 4 RR-TB 139 HR-TB 16 MDR-TB 12 Pre-XDR-TB 0 XDR-TB 94 Other
lineage Counts
lineage Count
lineage4.3.4.2.1 2
120
lineage4.1 2
lineage4.1.1 1
lineage2.2.1 14
lineage2.1 3
lineage4.9 69
lineage4 25
lineage3 3
lineage2.2 5
lineage4.8;La3 1
La1.8.1 4
lineage4.2.2.2 1
lineage4;lineage1.1 1
lineage4.7 2
lineage4.1.2.1 10
lineage4.2.1 1
lineage3.1 4
lineage2.2.1.1 1
lineage4.6.4 2
lineage4.8.1 1
lineage4.4.1.2 1
lineage4.6.1.1 3
La1 2
lineage4.1.3 2
La1.2 1
lineage4.9;La1.3 1
lineage2 4
lineage1.2.2.2 1
lineage2.2.1.2 1
lineage4.3.3 4
lineage4.3.2 2
lineage4.5 2
lineage1.1.2 1
lineage4.8 2
lineage4.6.2.2 1
lineage6.3.1 1
lineage4.4.1.1.1 2
lineage4.9;lineage2.2 1
lineage1.1.1 1
La1.4 1
La1.7.1 1
spoligotype Counts
spoligotype Count
None 307
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR161034 Other lineage4.3.4.2.1 None
ERR4815604 HR-TB None
SRR3675464 HR-TB lineage4.1 None
ERR176793 Other lineage4.1.1 None
SRR3675465 HR-TB None
ERR1035239 HR-TB None
ERR4814352 HR-TB lineage2.2.1 None
SRR3675311 Other None
SRR3416776 Other lineage2.1 None
SRR3675221 HR-TB None
ERR4815471 Other lineage4.9 None
SRR3675270 HR-TB None
SRR3675236 HR-TB None
SRR3675280 HR-TB lineage4.9 None
SRR3675284 HR-TB lineage4.9 None
SRR3675456 HR-TB None
SRR3675312 HR-TB lineage4 None
ERR4815752 Other lineage4.9 None
ERR4816999 Other None
ERR4816964 Other lineage4.9 None
ERR2027263 Other lineage4 None
ERR212001 HR-TB None
SRR3675545 HR-TB None
SRR3675555 HR-TB None
SRR5341422 HR-TB lineage2.1 None
ERR4817060 RR-TB None
ERR212034 HR-TB None
SRR3675558 HR-TB None
ERR4816466 HR-TB None
ERR4816470 Other lineage3 None
SRR3675572 Other None
ERR212138 HR-TB lineage4 None
ERR2446566 Other lineage4.1 None
SRR3742665 HR-TB None
ERR4817896 HR-TB lineage2.2.1 None
SRR7496472 Other None
ERR4816585 Other lineage2.2 None
ERR4815815 Sensitive lineage4 None
ERR4817893 Other lineage4.8;La3 None
ERR4818021 Other La1.8.1 None
ERR4818615 Other None
ERR234659 HR-TB None
ERR2513470 Other lineage4.2.2.2 None
SRR5341456 Other None
SRR5341373 HR-TB lineage4 None
ERR4819280 Sensitive lineage4 None
SRR5341400 HR-TB lineage4 None
SRR5341333 HR-TB None
ERR4819322 Other lineage4;lineage1.1 None
ERR4819357 Other lineage4.9 None
SRR5341432 HR-TB lineage4 None
SRR5266542 Pre-XDR-TB lineage2.2.1 ru
ERR4819781 Other lineage2.2.1 None
SRR5341293 HR-TB lineage4 None
ERR4819933 Other lineage4.9 None
ERR1035138 MDR-TB None
SRR5341302 HR-TB None
SRR5341313 HR-TB None
ERR4819932 Other lineage4.7 None
SRR5341330 HR-TB None
ERR4820854 Other lineage4.1.2.1 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5535933 HR-TB None
ERR2693238 HR-TB lineage4.9 None
SRR6045519 HR-TB None
SRR6044790 HR-TB None
SRR6046141 Other lineage4.9 None
SRR6045832 HR-TB lineage4.9 None
ERR2660539 Other lineage4.9 None
SRR6044875 HR-TB lineage4.9 None
SRR6044855 Other lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
SRR6045053 Other None
SRR6045952 HR-TB None
SRR6045205 Sensitive lineage4.9 None
SRR6046253 HR-TB lineage4.9 None
SRR6046046 Other None
SRR6045320 Other lineage4.9 None
SRR6046066 HR-TB None
SRR6046492 Other None
SRR6046299 HR-TB None
SRR6046305 Other lineage4.9 None
SRR6046385 Other lineage4.9 None
SRR6046382 HR-TB lineage2.2.1 None
SRR6785262 Sensitive lineage4.2.1 None
SRR6046540 HR-TB None
SRR6046878 HR-TB lineage4 None
SRR6458423 HR-TB lineage2.2.1 None
ERR323034 HR-TB lineage3.1 None
ERR4831117 HR-TB None
SRR6785227 Other lineage2.2.1 None
SRR6046514 HR-TB None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR323037 HR-TB lineage4 None
ERR485006 HR-TB lineage4.9 None
ERR4872102 MDR-TB lineage4.6.4 None
ERR294248 HR-TB None
SRR6785527 Sensitive lineage2.2.1 None
SRR6789626 Other None
ERR323038 HR-TB None
ERR502532 HR-TB None
ERR323036 HR-TB None
ERR5311099 HR-TB None
ERR5311090 HR-TB None
ERR5311081 HR-TB None
SRR7131023 Other lineage4.1.2.1 None
SRR9971270 RR-TB lineage2.2.1 None
SRR7496523 Other lineage4.7 None
SRR7496509 Other None
SRR8217918 HR-TB None
SRR7496517 Other None
ERR323043 HR-TB None
SRR7535086 Other None
SRR9971150 RR-TB lineage4.8.1 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR323048 Pre-XDR-TB lineage4.9 None
ERR323055 HR-TB None
ERR323056 HR-TB lineage4.4.1.2 None
ERR323054 HR-TB lineage3.1 None
ERR323063 HR-TB None
ERR1035157 Other lineage4.9 None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR1063839 HR-TB lineage2.2 None
ERR1063855 Other lineage4 None
ERR1063857 HR-TB None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR108471 HR-TB lineage4 None
ERR3283010 Other La1 None
ERR3283027 HR-TB None
ERR3283013 MDR-TB lineage4 None
ERR3283021 HR-TB None
ERR3283043 Other lineage4.9 None
ERR3283036 HR-TB None
ERR3283055 HR-TB None
ERR3283048 HR-TB lineage4.9 None
ERR3445502 HR-TB lineage4 None
ERR3445501 HR-TB None
ERR3445504 HR-TB None
ERR3797071 Other lineage4.9 None
ERR3468544 HR-TB None
ERR3797046 HR-TB None
ERR5336148 Other None
ERR3797016 HR-TB None
ERR3797023 HR-TB La1.8.1 None
ERR3797047 HR-TB lineage4 None
ERR3797073 HR-TB La1.8.1 None
ERR3797069 Other None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR3797083 HR-TB None
ERR3804155 Other lineage4.1.2.1 None
ERR3804169 HR-TB lineage4.1.3 None
ERR387051 HR-TB None
ERR4188350 HR-TB None
ERR4188247 HR-TB None
ERR473334 HR-TB lineage4.9 None
ERR473332 Other lineage4 None
ERR4407463 HR-TB None
ERR4596910 Sensitive lineage4 None
ERR4769521 HR-TB None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR4769450 HR-TB None
ERR4769497 HR-TB La1.2 None
ERR4769419 Other lineage4.9 None
ERR4769442 HR-TB lineage4 None
ERR4769452 HR-TB None
ERR4769457 Other lineage4.9 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4796577 MDR-TB None
ERR4797201 Other lineage1.2.2.2 None
ERR4797588 MDR-TB lineage3 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR4798262 HR-TB La1 None
ERR4800341 Other lineage3 None
ERR6359066 HR-TB lineage4 None
ERR4811022 HR-TB None
ERR4811105 HR-TB None
ERR4811493 HR-TB None
ERR6358837 HR-TB None
ERR6358951 HR-TB lineage4 None
ERR4810741 HR-TB None
ERR4811142 MDR-TB None
ERR5908228 Other lineage4.3.3 None
ERR6358755 Other lineage4.6.1.1 None
ERR736831 HR-TB lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR6866807 HR-TB lineage4 None
ERR6359070 Other lineage4.9 None
ERR6359069 Other lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR702406 HR-TB None
ERR736835 HR-TB None
ERR736837 Other lineage4.9 None
ERR772255 MDR-TB lineage4.3.2 None
ERR736867 HR-TB None
ERR736848 HR-TB None
ERR736874 HR-TB None
ERR752229 Other lineage4.5 None
ERR8976043 HR-TB None
ERR9117805 Other lineage4.3.2 None
ERR9117709 HR-TB None
ERR9117721 HR-TB lineage1.1.2 None
ERR9119096 Other lineage4.3.3 None
ERR9786604 Other None
ERR9119508 MDR-TB lineage4.6.4 None
ERR9786569 Other lineage4.8 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
ERR9786645 Other lineage4.6.2.2 None
ERR9786694 Other lineage4.1.2.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR9787139 Other lineage6.3.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9787197 Other None
ERR987765 Sensitive lineage4.6.1.1 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR10315551 Sensitive lineage2.2.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR1172234 Other None
SRR1169194 Other None
SRR1173363 HR-TB None
SRR1172857 MDR-TB None
SRR1172728 MDR-TB None
SRR1172807 Sensitive lineage4.9 None
SRR1172817 HR-TB None
SRR1172951 Other None
SRR1173118 Other None
SRR1173153 HR-TB None
SRR1173400 Other None
SRR1173384 Other lineage4 None
SRR1173562 HR-TB lineage4 None
SRR1173633 HR-TB lineage4.9 None
SRR1173778 Other None
SRR1173629 Other None
SRR1173706 Other lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1173788 Other None
SRR1175074 MDR-TB None
SRR1175512 Sensitive lineage4.9 None
SRR1175049 RR-TB None
SRR1175090 Other lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180420 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181351 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1183054 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1181402 Sensitive lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR1184294 HR-TB None
SRR1184312 HR-TB lineage2.2.1 None
SRR1196474 HR-TB lineage3.1 None
SRR1184388 Other None
SRR1184346 HR-TB lineage3.1 None
SRR1184372 MDR-TB None
SRR1184381 MDR-TB None
SRR1184380 HR-TB None
SRR1196566 HR-TB None
SRR1196494 MDR-TB None
SRR1196546 HR-TB None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR1196677 HR-TB lineage2 None
SRR12142341 HR-TB None
SRR1196768 MDR-TB None
SRR11972367 Sensitive lineage2.2.1 None
SRR1791696 Other La1.8.1 None
SRR14066533 Sensitive lineage1.1.1 None
SRR15368973 Other None
SRR16156775 Other lineage4.9 None
SRR12416824 HR-TB None
SRR16278274 Other La1.4 None
SRR1710057 Other lineage2.1 None
SRR19304036 HR-TB None
SRR1792478 HR-TB La1.7.1 None
SRR18003019 Other lineage2.2.1 None
SRR18910194 HR-TB lineage2.2 None
SRR18213713 HR-TB lineage4.5 None
SRR19303884 HR-TB None
SRR20632814 Sensitive lineage4 None
SRR20969677 HR-TB lineage2 None
SRR20969708 HR-TB lineage2.2 None
SRR21677886 Sensitive lineage4.9 None