Rv0005 - p.Thr500Asn


Drug resistance types
0 Sensitive 0 RR-TB 14 HR-TB 0 MDR-TB 135 Pre-XDR-TB 6 XDR-TB 27 Other
lineage Counts
lineage Count
lineage4.8 7
lineage4.3.3 17
lineage2.2.1 53
lineage1.1.2 2
lineage4.9 22
lineage3.1.3 1
lineage4.2.2.2 1
lineage4.1.2.1 5
lineage1.2.2.2 3
lineage2.2.2 24
lineage4.3.4.2 4
lineage3 7
lineage4.1.1.1 2
lineage4.9;lineage7 1
lineage4.1.1.3 10
lineage2.2 2
1
lineage4.2.2 2
lineage3.1.2.1;lineage4 1
lineage2.2.1.1 3
lineage4.5 2
lineage4.3.1;lineage4.9;lineage6 1
lineage4.1.2.1;lineage4.2.1 2
lineage1.1.2;lineage2.2.1;lineage3 1
lineage1.2.2.2;lineage3 1
La1;lineage4.9 1
lineage4.3.2 1
lineage4.9;lineage6.1.3 1
lineage2.2.1.2;lineage7 1
lineage4 1
lineage3.1.2 1
lineage4.4.1.1.1 1
spoligotype Counts
spoligotype Count
None 182
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR27107274 Pre-XDR-TB lineage4.8 None
SRR1169040 Pre-XDR-TB lineage4.3.3 None
ERR13267123 Pre-XDR-TB lineage2.2.1 None
SRR10500314 Pre-XDR-TB lineage1.1.2 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR1163204 Pre-XDR-TB lineage4.3.3 None
ERR3335755 Pre-XDR-TB lineage3.1.3 pk
SRR16088557 Pre-XDR-TB lineage2.2.1 None
SRR28044944 XDR-TB lineage4.2.2.2 None
ERR4813826 Pre-XDR-TB lineage4.1.2.1 None
ERR6359066 HR-TB lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR4796484 Pre-XDR-TB lineage1.2.2.2 in
DRR130189 Pre-XDR-TB lineage2.2.1 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SAMN02360626 Pre-XDR-TB lineage2.2.2 kr
ERR4813156 Pre-XDR-TB lineage4.3.4.2 pe
SRR4423147 Pre-XDR-TB lineage3 None
ERR8665957 Pre-XDR-TB lineage2.2.1 None
ERR4553683 Pre-XDR-TB lineage4.1.1.1 None
SRR6458440 Pre-XDR-TB lineage4.3.3 None
SRR6280174 Pre-XDR-TB lineage2.2.1 cn
ERR459444 Pre-XDR-TB lineage4.8 None
SRR25207180 XDR-TB lineage2.2.2 None
SRR24256149 Pre-XDR-TB lineage4.3.3 None
ERR5917670 Pre-XDR-TB lineage4.3.3 by
SRR13423559 Pre-XDR-TB lineage2.2.1 None
SRR14782405 HR-TB lineage4.9 None
SRR22873607 XDR-TB lineage2.2.1 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR24256367 Pre-XDR-TB lineage2.2.1 None
SRR16156800 Pre-XDR-TB lineage4.1.1.3 None
ERR4799513 HR-TB lineage2.2 None
SRR1013561 Pre-XDR-TB lineage2.2.2 None
SAMN02419678 Pre-XDR-TB lineage4.3.3 by
ERR1035271 Pre-XDR-TB lineage4.3.4.2 br
SRR10315594 Pre-XDR-TB lineage2.2.2 None
ERR4827599 Pre-XDR-TB lineage2.2.1 None
SRR6964525 Pre-XDR-TB lineage2.2.1 None
SRR2024966 Pre-XDR-TB lineage2.2.1 cn
SRR29017140 Pre-XDR-TB lineage1.2.2.2 None
ERR4553429 HR-TB None
SRR1048845 Pre-XDR-TB lineage2.2.2 None
SRR11662690 HR-TB lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR30180352 Pre-XDR-TB lineage2.2.2 None
SAMN02360560 Pre-XDR-TB lineage2.2.2 kr
SRR1011519 Pre-XDR-TB lineage4.2.2 None
ERR3287580 Pre-XDR-TB lineage4.3.4.2 None
ERR3283055 HR-TB lineage4.9 None
SRR13423557 Pre-XDR-TB lineage2.2.1 None
SRR28351455 Other lineage3.1.2.1;lineage4 None
SRR6045832 Other lineage4.9 None
ERR13267103 Pre-XDR-TB lineage2.2.1 None
ERR8665822 Pre-XDR-TB lineage2.2.1 None
ERR4813845 Pre-XDR-TB lineage4.1.2.1 None
ERR4799155 Pre-XDR-TB lineage2.2.1.1 in
SRR28351172 Pre-XDR-TB lineage2.2.1 None
SRR6458427 Pre-XDR-TB lineage4.3.3 None
ERR459446 Pre-XDR-TB lineage4.8 None
SRR7069180 Pre-XDR-TB lineage2.2.1 None
ERR3148197 Pre-XDR-TB lineage4.1.1.3 mx
SRR23310939 HR-TB lineage4.3.3 None
ERR459447 Pre-XDR-TB lineage4.8 None
SRR14520076 Other lineage4.5 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR6046046 Other lineage4.9 None
ERR8665956 Pre-XDR-TB lineage2.2.1 None
SRR9971327 Pre-XDR-TB lineage2.2.2 None
SRR29093109 Pre-XDR-TB lineage2.2.2 None
SRR29094026 Pre-XDR-TB lineage2.2.1 None
SRR2024961 Pre-XDR-TB lineage2.2.1 cn
SRR18714843 Pre-XDR-TB lineage4.3.3 None
ERR4799025 Other lineage4.8 None
SRR6356970 Pre-XDR-TB lineage4.1.2.1;lineage4.2.1 None
ERR2446566 Other lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR26056433 HR-TB lineage3 None
SRR1172393 Pre-XDR-TB lineage4.3.3 None
SRR6045347 Other lineage4.9 None
SRR29093533 Pre-XDR-TB lineage2.2.1 None
ERR4769450 Other lineage4.9 None
ERR688035 Pre-XDR-TB lineage4.1.1.3 None
ERR5917716 Pre-XDR-TB lineage2.2.1 by
SRR11567794 Pre-XDR-TB lineage2.2.1 None
SRR21277679 Other lineage2.2.1.1 None
SRR2024955 Pre-XDR-TB lineage2.2.1 cn
ERR13266782 Pre-XDR-TB lineage2.2.2 None
SRR1048844 Pre-XDR-TB lineage2.2.2 None
ERR775299 Pre-XDR-TB lineage4.3.3 pe
ERR4769493 Other lineage4.9 None
ERR11081998 Pre-XDR-TB lineage2.2.1 None
SRR16156791 Pre-XDR-TB lineage4.1.1.3 None
ERR7911618 Pre-XDR-TB lineage2.2.1 za
ERR1873531 Pre-XDR-TB lineage4.1.1.3 za
SRR22461697 Pre-XDR-TB lineage4.3.3 None
SRR25827357 XDR-TB lineage1.1.2;lineage2.2.1;lineage3 None
SRR18593215 Pre-XDR-TB lineage4.8 None
ERR7911226 Pre-XDR-TB lineage2.2.1 md
ERR4011066 Pre-XDR-TB lineage2.2.1 None
SRR5067601 Other lineage2.2.1 vn
SAMN02360552 Pre-XDR-TB lineage2.2.2 kr
ERR4798336 Pre-XDR-TB lineage1.2.2.2;lineage3 in
ERR6359082 Other lineage4.9 None
SRR28351204 Pre-XDR-TB lineage1.2.2.2 None
SRR28393326 Pre-XDR-TB lineage4.3.4.2 None
ERR1034603 Pre-XDR-TB lineage4.1.1.3 pk
ERR4818536 Other lineage4.9 None
ERR459445 Pre-XDR-TB lineage4.8 None
ERR4769497 Other La1;lineage4.9 None
SRR1013562 Pre-XDR-TB lineage2.2.2 None
ERR4799908 Pre-XDR-TB lineage3 in
SRR1163399 Pre-XDR-TB lineage4.3.3 None
SRR26937066 Pre-XDR-TB lineage2.2.1 None
ERR4812737 Other lineage4.3.2 pe
ERR11068063 Pre-XDR-TB lineage2.2.1 None
SRR1048862 Pre-XDR-TB lineage2.2.2 None
ERR13261301 Pre-XDR-TB lineage3 None
ERR13267115 Pre-XDR-TB lineage2.2.1 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR1003106 Pre-XDR-TB lineage2.2.2 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR752229 Other lineage4.5 None
SRR28888045 Pre-XDR-TB lineage4.3.3 None
SRR1048010 Pre-XDR-TB lineage2.2.2 None
ERR8665633 Pre-XDR-TB lineage2.2.1 None
ERR4798106 Pre-XDR-TB lineage4.3.3 in
ERR8665606 Pre-XDR-TB lineage2.2.1 None
SRR13232675 Pre-XDR-TB lineage4.3.3 None
SRR6045053 Other lineage4 None
SRR20969708 HR-TB lineage2.2 None
SRR22175251 Pre-XDR-TB lineage2.2.1 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR10380173 Pre-XDR-TB lineage4.3.3 None
SRR1003104 Pre-XDR-TB lineage2.2.2 None
SRR6046492 Other lineage4.9 None
ERR1873392 Pre-XDR-TB lineage4.1.1.3 None
SRR7069162 Pre-XDR-TB lineage2.2.1 None
ERR9993138 Pre-XDR-TB lineage4.1.2.1 None
SRR5341330 Other lineage4.9 None
SRR4423144 Pre-XDR-TB lineage4.1.1.1 None
ERR4831481 Pre-XDR-TB lineage1.1.2 None
SRR1144771 Pre-XDR-TB lineage2.2.2 None
ERR8665634 Pre-XDR-TB lineage2.2.1 None
SRR1013546 Pre-XDR-TB lineage2.2.2 None
ERR4798136 Pre-XDR-TB lineage2.2.1 in
SRR6356993 Pre-XDR-TB lineage4.1.2.1;lineage4.2.1 None
SRR1048861 Pre-XDR-TB lineage2.2.2 None
ERR9993137 Pre-XDR-TB lineage4.1.2.1 None
ERR3797046 HR-TB lineage4.9 None
SRR23340154 Pre-XDR-TB lineage2.2.1 None
ERR4769452 Other lineage4.9 None
SRR16588747 Pre-XDR-TB lineage2.2.1 None
ERR4813132 Pre-XDR-TB lineage4.1.2.1 None
SRR15722980 Other lineage2.2.1 None
SRR24710145 XDR-TB lineage2.2.1 None
SRR7517805 Pre-XDR-TB lineage2.2.1 None
SRR5341456 Other lineage4.9 None
ERR2510606 Pre-XDR-TB lineage3 pk
ERR13289027 Pre-XDR-TB lineage2.2.2 None
ERR13285169 Pre-XDR-TB lineage2.2.1 None
SRR25207171 Pre-XDR-TB lineage2.2.1 None
SRR12420742 Pre-XDR-TB lineage2.2.1 None
SRR3105791 Pre-XDR-TB lineage3 None
ERR4800344 Pre-XDR-TB lineage3.1.2 in
SRR16156779 Pre-XDR-TB lineage4.1.1.3 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR6046141 Other lineage4.9 None
ERR13267483 Pre-XDR-TB lineage2.2.1 None
ERR4799582 Pre-XDR-TB lineage2.2.1 in
SRR16156780 Pre-XDR-TB lineage4.1.1.3 None
SRR10315593 Pre-XDR-TB lineage2.2.2 None
SRR1013545 Pre-XDR-TB lineage2.2.2 None
ERR11044488 Pre-XDR-TB lineage2.2.1.1 None
ERR3148175 Pre-XDR-TB lineage4.1.1.3 mx
ERR4796781 Pre-XDR-TB lineage2.2.1 in
ERR4797453 Pre-XDR-TB lineage2.2.1 in
SRR12142339 HR-TB lineage2.2.1 None
SRR10315595 Pre-XDR-TB lineage2.2.2 None
SRR25827540 XDR-TB lineage2.2.1 None
ERR4799102 Pre-XDR-TB lineage3 in
SRR833217 Pre-XDR-TB lineage4.2.2 None