EBG00000313339 - n.265A>G
Drug resistance types
64 Sensitive
10 RR-TB
43 HR-TB
12 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
44 Other
lineage Counts
| lineage | Count |
|---|---|
| 48 | |
| lineage4 | 54 |
| lineage4.8 | 14 |
| lineage2.2.1 | 15 |
| lineage4.9 | 16 |
| lineage4.1.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage5 | 1 |
| lineage3 | 4 |
| lineage4.1.2 | 4 |
| lineage4.1 | 2 |
| lineage4.7 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.6.1.1 | 2 |
| lineage3.1.2.1 | 2 |
| lineage1.1.2 | 1 |
| lineage2.2 | 2 |
| lineage4.5 | 2 |
| lineage1.1.3.1 | 1 |
| lineage6.1.3 | 1 |
| lineage2.2.1.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.3.3 | 1 |
| lineage2.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 181 |
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1035138 | MDR-TB | None | SRR5341300 | Other | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341456 | Other | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341330 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | SRR5535933 | HR-TB | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | SRR6045480 | Other | lineage4.1.1 | None | ERR4821573 | HR-TB | lineage1.2.1.2.1 | gb | ERR2660539 | Other | lineage4.9 | None | ERR4821310 | Other | lineage5 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045627 | Sensitive | lineage2.2.1 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6045158 | Other | lineage4.9 | None | SRR6045053 | Other | None | SRR6046517 | Other | lineage4.8 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046299 | HR-TB | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR6046442 | Other | lineage3 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | ERR4829237 | Sensitive | lineage4.1.2 | None | SRR6046492 | Other | None | SRR6046878 | HR-TB | lineage4 | None | SRR7131138 | Sensitive | lineage4.1.2 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR6511621 | HR-TB | None | ERR4831117 | HR-TB | None | ERR323035 | Sensitive | lineage4.9 | None | SRR7496471 | Sensitive | None | SRR7535082 | Sensitive | lineage4 | None | SRR7496523 | Other | lineage4.7 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323107 | Other | lineage4 | None | ERR323066 | Sensitive | lineage4 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323085 | Sensitive | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | ERR1063896 | Sensitive | None | ERR1034613 | Pre-XDR-TB | lineage3 | pk | ERR1035122 | Sensitive | None | ERR067699 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR11044759 | MDR-TB | lineage2.2.1 | None | ERR323115 | Sensitive | lineage4 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR133825 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283047 | HR-TB | None | ERR3283028 | Other | None | ERR3283014 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283055 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797087 | Sensitive | lineage4 | None | ERR387051 | HR-TB | None | ERR4024991 | Other | None | ERR405209 | Sensitive | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4188247 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR4769450 | HR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4796577 | MDR-TB | None | ERR4796954 | MDR-TB | lineage3.1.2.1 | in | ERR4797264 | Sensitive | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR4797728 | Sensitive | lineage1.1.2 | in | ERR4798099 | Other | None | ERR4797474 | Other | None | ERR4799025 | Pre-XDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6866410 | Sensitive | None | ERR5865915 | MDR-TB | lineage2.2.1 | None | ERR6358979 | Other | None | ERR6866022 | Other | None | ERR4811493 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR688045 | Pre-XDR-TB | lineage3 | None | ERR6866547 | Sensitive | lineage4 | None | ERR736848 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | SRR1173568 | Other | lineage4.9 | None | ERR751326 | Sensitive | lineage4 | None | ERR970413 | MDR-TB | lineage2.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1173139 | Sensitive | lineage4.9 | None | ERR736875 | HR-TB | lineage4 | None | ERR752229 | Other | lineage4.5 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR970445 | MDR-TB | lineage2.2.1 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR10808490 | Sensitive | lineage2.2.1.1 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10808805 | Sensitive | None | SRR1158918 | Sensitive | lineage4 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1173833 | Other | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR1180996 | HR-TB | lineage4 | None | SRR20969463 | Pre-XDR-TB | lineage2.2.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR14801749 | Sensitive | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20632814 | Sensitive | lineage4 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR2229577 | Sensitive | lineage4.8 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR176779 | HR-TB | None | ERR181744 | HR-TB | None | ERR1750906 | Sensitive | lineage4.3.3 | za | ERR2229541 | Other | lineage4.8 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR1750920 | Sensitive | lineage4.4.1.1 | za | SRR2024953 | MDR-TB | lineage2.2.1 | cn | ERR2229811 | Other | lineage4.8 | dk | ERR1950064 | Other | lineage4 | None | ERR2229733 | Other | lineage4.8 | dk | ERR2229147 | Other | lineage4.8 | None | ERR4816470 | Other | lineage3 | None | ERR4816110 | Sensitive | lineage4.9 | gb | ERR212034 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212123 | Other | None | ERR212138 | HR-TB | lineage4 | None | ERR2229436 | Other | lineage4.8 | None | ERR4816548 | MDR-TB | lineage4.5 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR2229366 | Other | lineage4.8 | None | ERR2228838 | RR-TB | lineage4.8 | None | SRR5341366 | Sensitive | lineage4 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4819051 | Other | lineage4 | None | ERR2446566 | Other | lineage4.1 | None | SRR5341453 | Sensitive | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4819307 | RR-TB | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None |
|---|
