lineage | Count |
---|---|
La3;lineage4.9 | 7 |
lineage2.2.1.2;lineage7 | 1 |
lineage2.2.1.2 | 1 |
La3;lineage2.1;lineage4.9 | 1 |
lineage2.2.1 | 1 |
lineage4.9 | 12 |
lineage3.1.2.2 | 1 |
lineage2.2 | 2 |
La1.2.BCG | 1 |
lineage3.1.2.1;lineage4 | 1 |
lineage4.5 | 1 |
lineage4.6.3;lineage4.9 | 1 |
La2;lineage4.9 | 1 |
La3;lineage4.3.4 | 1 |
lineage4.9;lineage7 | 1 |
1 | |
La1.7;M.canetti;lineage4.9 | 1 |
M.canetti;lineage4.9;lineage9 | 1 |
spoligotype | Count |
---|---|
None | 36 |
ID | Drug resistance | Lineage | Country iso2 | SRR1167384 | Other | La3;lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR161037 | Other | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR28351455 | Other | lineage3.1.2.1;lineage4 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR176751 | Other | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR987722 | MDR-TB | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR5535933 | Other | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None |
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