Rv0407 - c.462T>C


Drug resistance types
41 Sensitive 4 RR-TB 163 HR-TB 21 MDR-TB 4 Pre-XDR-TB 0 XDR-TB 114 Other
lineage Counts
lineage Count
lineage4 30
171
lineage4.5 3
lineage1.1.2 2
lineage4.1.2.1.1 1
lineage4.3.2 1
lineage1.1.3.2 1
lineage4.3.3 3
lineage5.2 2
lineage4.1.2.1 12
lineage4.8 7
lineage4.6.2.2 3
lineage6 1
lineage4.1.3 2
lineage6.3.1 1
lineage2 3
lineage2.2.1.2 1
lineage4.4.1.1 3
lineage2.2.1 15
lineage3.1 4
lineage1.1.3.1 1
lineage4.9 45
lineage2.1 2
La1.8.1 3
lineage4.1 1
lineage2.2 6
lineage3;lineage2.1 1
lineage4.3.4 1
lineage3 5
lineage4.1.1.3 1
lineage4;lineage1.1.2 1
lineage4.8;La3 1
lineage4;lineage1.1 1
lineage4.1.1 1
lineage4.1.1.2 1
lineage1.1 1
La2 1
lineage4.1.2 1
lineage4.3.4.2.1 1
La1 2
lineage1.2.2.2 1
lineage3.1.2 1
La1.2 1
lineage4.6.1.1 1
spoligotype Counts
spoligotype Count
None 347
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR6866547 Sensitive lineage4 None
ERR6866639 Other None
ERR702406 HR-TB None
ERR6866807 HR-TB lineage4 None
ERR736874 HR-TB None
ERR736867 HR-TB None
ERR736872 Sensitive lineage4 None
ERR736834 Sensitive lineage4 None
ERR736835 HR-TB None
ERR752229 Other lineage4.5 None
ERR9117721 HR-TB lineage1.1.2 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR772255 MDR-TB lineage4.3.2 None
ERR7821123 Other lineage1.1.3.2 None
ERR8976043 HR-TB None
ERR9117709 HR-TB None
ERR9786604 Other None
ERR9119096 Other lineage4.3.3 None
ERR9119500 MDR-TB lineage5.2 None
ERR9786421 Other lineage4.1.2.1 None
ERR9786515 Other lineage4.1.2.1 None
ERR9786569 Other lineage4.8 None
ERR9119669 HR-TB None
ERR9787197 Other None
ERR9786645 Other lineage4.6.2.2 None
ERR9786682 Other lineage4.1.2.1 None
ERR9786694 Other lineage4.1.2.1 None
ERR9787165 Other lineage6 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786671 Other None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR9787139 Other lineage6.3.1 None
SRR1163221 HR-TB lineage4.1.2.1 None
SRR069989 HR-TB lineage2 None
SRR10808805 Sensitive None
SRR10809074 Sensitive lineage4 None
SRR1162740 Other lineage4.1.2.1 None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1172234 Other None
SRR1172728 MDR-TB None
SRR1169194 Other None
SRR1172857 MDR-TB None
SRR1172817 HR-TB None
SRR1173118 Other None
SRR1172951 Other None
SRR1173363 HR-TB None
SRR1173788 Other None
SRR1173400 Other None
SRR1173453 Other lineage4.4.1.1 None
SRR1173629 Other None
SRR1173767 HR-TB lineage4.4.1.1 None
SRR1173778 Other None
SRR1184294 HR-TB None
SRR1175074 MDR-TB None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR1184312 HR-TB lineage2.2.1 None
SRR1196494 MDR-TB None
SRR1184381 MDR-TB None
SRR1184346 HR-TB lineage3.1 None
SRR1184380 HR-TB None
SRR1184388 Other None
SRR1196474 HR-TB lineage3.1 None
SRR1196546 HR-TB None
SRR12142341 HR-TB None
SRR1196566 HR-TB None
SRR1196768 MDR-TB None
SRR11972431 Sensitive lineage1.1.3.1 None
SRR13861151 RR-TB lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
SRR12416824 HR-TB None
SRR13423544 Other lineage4.5 None
SRR13837677 Sensitive lineage4.9 None
SRR13861296 Sensitive lineage4.9 None
SRR13861291 Sensitive lineage4.9 None
SRR13861381 MDR-TB lineage4.9 None
SRR13861386 HR-TB lineage4.9 None
SRR13861397 HR-TB lineage4.9 None
SRR13861305 Other lineage4.9 None
SRR13861396 HR-TB lineage4.9 None
SRR13861564 Sensitive lineage4.9 None
SRR13861434 RR-TB lineage4.9 None
SRR13861528 HR-TB lineage4.9 None
SRR13861413 Sensitive lineage4.9 None
SRR13861424 RR-TB lineage4.9 None
SRR13861534 Other lineage4.9 None
SRR18213713 HR-TB lineage4.5 None
SRR14782405 HR-TB None
SRR1640750 HR-TB None
SRR1710057 Other lineage2.1 None
SRR1791696 Other La1.8.1 None
SRR18003019 Other lineage2.2.1 None
SRR13861663 Sensitive lineage4.9 None
SRR14801749 Sensitive None
SRR15368973 Other None
SRR3675464 HR-TB lineage4.1 None
SRR19303884 HR-TB None
SRR20969677 HR-TB lineage2 None
SRR20969731 Other lineage2.2.1 None
SRR20970016 Other lineage2.2 None
SRR3675472 Sensitive lineage4.9 None
SRR18910194 HR-TB lineage2.2 None
SRR19304036 HR-TB None
SRR20969708 HR-TB lineage2.2 None
SRR3675473 Sensitive lineage4.9 None
ERR1035239 HR-TB None
SRR6325445 HR-TB None
SRR3675465 HR-TB None
ERR4814352 HR-TB lineage2.2.1 None
SRR3675482 HR-TB None
ERR161033 HR-TB None
SRR3675488 HR-TB None
ERR4814536 MDR-TB lineage3;lineage2.1 None
ERR161039 Sensitive lineage4.3.4 None
SRR3675486 HR-TB None
SRR3416776 Other lineage2.1 None
ERR181744 HR-TB None
SRR3675221 HR-TB None
SRR3675501 HR-TB None
SRR3675222 Other None
SRR3675229 Other lineage4 None
SRR3675280 HR-TB lineage4.9 None
SRR3675236 HR-TB None
SRR3675246 Sensitive lineage4 None
SRR3675234 Other None
SRR3675270 HR-TB None
SRR3675311 Other None
SRR3675284 HR-TB lineage4.9 None
ERR4815752 Other lineage4.9 None
SRR3675312 HR-TB lineage4 None
SRR3675383 HR-TB None
SRR3675387 Sensitive None
SRR3675456 HR-TB None
SRR3675455 Sensitive lineage4 None
ERR2229542 Other lineage4.8 None
ERR3275220 Other lineage3 nl
SRR3675522 Other None
ERR4817037 Other lineage4.9 None
SRR3675545 HR-TB None
ERR4816151 Other lineage4.8 None
ERR4816999 Other None
ERR2027263 Other lineage4 None
ERR212034 HR-TB None
SRR3675553 Sensitive lineage4.9 None
ERR4817060 RR-TB None
SRR3675555 HR-TB None
SRR3675558 HR-TB None
ERR2229369 Other lineage4.8 None
SRR3675572 Other None
SRR3675574 HR-TB None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR3742665 HR-TB None
ERR4816585 Other lineage2.2 None
ERR212123 Other None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4817692 HR-TB lineage4;lineage1.1.2 None
ERR4817735 Other lineage4.8 None
ERR4817893 Other lineage4.8;La3 None
ERR4819322 Other lineage4;lineage1.1 None
ERR2229143 Other lineage4.1.1 None
ERR4818252 Other lineage4.1.1.2 None
ERR2446144 Other lineage3 nl
ERR4818021 Other La1.8.1 None
ERR234659 HR-TB None
ERR2509673 Other lineage2.2.1 None
ERR4818607 Sensitive lineage4.9 None
ERR1035138 MDR-TB None
ERR2514327 HR-TB lineage4.8 None
SRR5341456 Other None
ERR4819470 Sensitive lineage4.8 None
SRR5341302 HR-TB None
ERR4819781 Other lineage2.2.1 None
ERR2514692 Other None
SRR5341330 HR-TB None
SRR5341333 HR-TB None
ERR6359082 Other lineage4.9 None
ERR2693238 HR-TB lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2693231 Other None
ERR2517475 Other lineage4 None
ERR2693230 Other None
ERR4821053 Other lineage3 None
ERR2693239 HR-TB None
ERR2693257 Other None
ERR2693254 Other None
SRR6045526 HR-TB None
SRR6045503 HR-TB None
ERR278594 HR-TB None
SRR5535933 HR-TB None
SRR6045519 HR-TB None
ERR2660539 Other lineage4.9 None
SRR6045555 HR-TB None
ERR4821655 Sensitive lineage4 None
SRR6044790 HR-TB None
SRR5709967 MDR-TB lineage2.2.1 None
SRR6046133 HR-TB None
ERR2693232 Other lineage4.9 None
SRR6045892 Sensitive None
SRR6045952 HR-TB None
SRR6044875 HR-TB lineage4.9 None
SRR6044890 Other lineage4.9 None
SRR6045053 Other None
SRR6046253 HR-TB lineage4.9 None
SRR6045217 Other lineage4 None
SRR6045233 HR-TB None
SRR6045327 HR-TB None
SRR6046046 Other None
SRR6046066 HR-TB None
SRR6046225 HR-TB None
SRR6046482 HR-TB None
SRR6046382 HR-TB lineage2.2.1 None
ERR4830353 Other None
SRR6046305 Other lineage4.9 None
SRR6325444 HR-TB None
SRR6046362 HR-TB None
SRR6046397 Other None
SRR6046460 HR-TB None
SRR6046594 HR-TB lineage4 None
SRR6325448 HR-TB None
SRR6046514 HR-TB None
SRR6046540 HR-TB None
SRR6046644 HR-TB None
SRR6046878 HR-TB lineage4 None
SRR6325447 HR-TB None
SRR6397654 HR-TB lineage4.1.2.1 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR323034 HR-TB lineage3.1 None
ERR3077978 Other lineage1.1 None
SRR6325442 HR-TB None
ERR4831117 HR-TB None
ERR4872094 MDR-TB lineage5.2 None
ERR294248 HR-TB None
ERR323036 HR-TB None
SRR6785227 Other lineage2.2.1 None
SRR6789626 Other None
SRR6785413 Other lineage2.2.1 None
ERR502510 Sensitive lineage4 None
ERR502524 HR-TB La2 None
ERR5311099 HR-TB None
ERR502532 HR-TB None
SRR7496517 Other None
ERR5311090 HR-TB None
SRR7131023 Other lineage4.1.2.1 None
ERR5311081 HR-TB None
ERR323038 HR-TB None
SRR8217918 HR-TB None
SRR7585435 Other lineage4.9 None
SRR7535086 Other None
SRR9970978 Sensitive lineage4.1.2 None
ERR323041 HR-TB None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR323055 HR-TB None
ERR323043 HR-TB None
ERR323066 Sensitive lineage4 None
ERR323054 HR-TB lineage3.1 None
ERR323063 HR-TB None
ERR1023525 HR-TB lineage4 None
ERR323085 Sensitive lineage4 None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR1035157 Other lineage4.9 None
ERR1034652 Other None
ERR1063857 HR-TB None
ERR1063839 HR-TB lineage2.2 None
ERR1063883 Sensitive lineage4 None
ERR1063858 HR-TB None
ERR1063859 HR-TB None
ERR108471 HR-TB lineage4 None
ERR1063896 Sensitive None
ERR323115 Sensitive lineage4 None
ERR3283030 HR-TB lineage4.9 None
ERR3283024 Other None
ERR3283010 Other La1 None
ERR3283013 MDR-TB lineage4 None
ERR3283017 HR-TB None
ERR3283027 HR-TB None
ERR3283048 HR-TB lineage4.9 None
ERR3283040 HR-TB None
ERR3283036 HR-TB None
ERR3283032 HR-TB None
ERR3283043 Other lineage4.9 None
ERR3468544 HR-TB None
ERR3283051 Other lineage4.9 None
ERR3283058 Other lineage4.9 None
ERR3445501 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR3283055 HR-TB None
ERR3445504 HR-TB None
ERR3797043 HR-TB None
ERR3797014 Other None
ERR3797023 HR-TB La1.8.1 None
ERR3797016 HR-TB None
ERR3797024 Other lineage4.9 None
ERR3797015 HR-TB None
ERR3797017 Other None
ERR3797046 HR-TB None
ERR3797061 Other None
ERR3797036 HR-TB None
ERR3797044 Other None
ERR3797058 Other lineage4.9 None
ERR3797082 Other lineage4.9 None
ERR3797069 Other None
ERR3797080 HR-TB lineage4.9 None
ERR3797063 HR-TB None
ERR3804169 HR-TB lineage4.1.3 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR3797083 HR-TB None
ERR4796929 Sensitive lineage4 None
ERR400336 Sensitive lineage4 None
ERR5336148 Other None
ERR4188350 HR-TB None
ERR4769450 HR-TB None
ERR387051 HR-TB None
ERR400320 Sensitive lineage4 None
ERR400345 Other lineage4 None
ERR4407463 HR-TB None
ERR473332 Other lineage4 None
ERR4769452 HR-TB None
ERR4769521 HR-TB None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4797201 Other lineage1.2.2.2 None
ERR4797588 MDR-TB lineage3 None
ERR4797350 Sensitive lineage4.9 None
ERR4798099 Other None
ERR4800341 Other lineage3 None
ERR4798262 HR-TB La1 None
ERR4798586 Sensitive lineage1.1.2 in
ERR4799378 Sensitive lineage4 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4798648 HR-TB lineage3.1.2 None
ERR4799025 Pre-XDR-TB None
ERR4799513 HR-TB lineage2.2 None
ERR4811022 HR-TB None
ERR4810741 HR-TB None
ERR4811493 HR-TB None
ERR4811142 MDR-TB None
ERR4811105 HR-TB None
ERR5908228 Other lineage4.3.3 None
ERR4812155 Sensitive None
ERR6358837 HR-TB None
ERR6198317 Other La1.2 None
ERR5917710 Other lineage4.1.2.1 None
ERR6358755 Other lineage4.6.1.1 None
ERR6358979 Other None
ERR6359045 HR-TB None