lineage | Count |
---|---|
lineage4.1.1.3 | 2 |
lineage4.6.2.2 | 2 |
lineage4.1.2.1 | 3 |
lineage4.9 | 31 |
lineage2.2 | 4 |
2 | |
lineage4.9;lineage6.1.3 | 1 |
lineage2.2.1 | 5 |
lineage3.1.2.1 | 1 |
lineage4 | 1 |
lineage4.6.3;lineage4.9 | 1 |
lineage4.8 | 1 |
lineage4.1;lineage4.8 | 2 |
La1.2;La1.8.1 | 1 |
M.canetti;lineage2.2.2;lineage6.2 | 2 |
La3;lineage4.9 | 4 |
lineage4.4.2 | 1 |
La1;lineage4.9 | 1 |
M.canetti;lineage2.2 | 2 |
lineage3.1.2.1;lineage4 | 1 |
lineage2.2.1.2;lineage7 | 1 |
lineage4.3.1;lineage4.9;lineage6 | 1 |
lineage4.3.4.2.1 | 2 |
lineage3 | 1 |
lineage4.9;lineage7 | 1 |
lineage4.5 | 1 |
spoligotype | Count |
---|---|
None | 75 |
ID | Drug resistance | Lineage | Country iso2 | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR6359082 | Other | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR212001 | HR-TB | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1183049 | RR-TB | lineage2.2 | None | SRR29096943 | Sensitive | lineage3.1.2.1 | None | SRR6045053 | Other | lineage4 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR6046492 | Other | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | SRR6045347 | Other | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR7821163 | Other | lineage2.2.1 | None | SRR5341456 | Other | lineage4.9 | None | ERR9786843 | Other | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | SRR6046878 | Other | lineage4.9 | None | ERR13285192 | Sensitive | lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | SRR28351455 | Other | lineage3.1.2.1;lineage4 | None | SRR6045010 | Sensitive | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR5341330 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR161149 | Sensitive | lineage4.3.4.2.1 | mw | ERR990545 | Other | lineage3 | None | ERR13285191 | Sensitive | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR29096178 | Sensitive | lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR26399239 | Sensitive | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | SRR3675270 | Other | lineage4.9 | None | SRR29096784 | Sensitive | lineage4.9 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | ERR3797048 | Other | La3;lineage4.9 | None |
---|