lineage | Count |
---|---|
40 | |
lineage4 | 18 |
lineage4.1.2.1 | 5 |
lineage3 | 5 |
lineage4.9 | 11 |
La1.2 | 1 |
lineage4.5 | 4 |
lineage2.2 | 2 |
La1.8.2 | 2 |
La1.7.X-unk4 | 1 |
lineage1.1.3.1 | 1 |
lineage4.8 | 6 |
lineage2.2.1 | 13 |
lineage4.3.4.2 | 1 |
lineage5.3 | 1 |
lineage1.1.2 | 1 |
lineage4.2.1 | 1 |
lineage4.1.2 | 1 |
lineage7;lineage2.2.1.2 | 1 |
La1.8.1 | 1 |
lineage4.2.2.2 | 1 |
lineage4.8.1 | 1 |
lineage4.3.2.1 | 4 |
lineage4.1 | 1 |
lineage4.1.1.2 | 1 |
lineage4.4.1.1 | 2 |
spoligotype | Count |
---|---|
None | 126 |
ID | Drug resistance | Lineage | Country iso2 | ERR1063858 | HR-TB | None | ERR323045 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR11049029 | HR-TB | lineage4.1.2.1 | None | ERR11044563 | Sensitive | lineage3 | None | ERR11044895 | Sensitive | lineage3 | None | ERR11044908 | Sensitive | lineage4.1.2.1 | None | ERR3283021 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR3797046 | HR-TB | None | ERR4627394 | Sensitive | None | ERR387051 | HR-TB | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR4797313 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4769450 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR4811030 | Sensitive | None | ERR736856 | HR-TB | lineage4 | None | ERR4811493 | HR-TB | None | ERR4812155 | Sensitive | None | ERR6140805 | Other | La1.8.2 | None | ERR6139678 | Other | La1.8.2 | None | ERR6866410 | Sensitive | None | ERR11050090 | Other | La1.7.X-unk4 | None | ERR752229 | Other | lineage4.5 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR11050070 | Sensitive | lineage4.8 | None | ERR11049951 | Sensitive | lineage2.2.1 | None | ERR11049984 | Other | lineage4.5 | None | ERR11050045 | HR-TB | lineage4.3.4.2 | None | ERR11050086 | HR-TB | lineage4 | None | ERR11050104 | Sensitive | lineage3 | None | ERR11050107 | Sensitive | lineage4.5 | None | SRR14781854 | HR-TB | lineage4.8 | None | ERR11050110 | Sensitive | lineage2.2.1 | None | ERR11050224 | MDR-TB | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | ERR11050123 | RR-TB | lineage5.3 | None | ERR11050164 | Other | lineage1.1.2 | None | ERR11050195 | Sensitive | lineage4.1.2.1 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR14782300 | MDR-TB | lineage4.2.1 | None | SRR14781933 | Sensitive | lineage2.2.1 | None | SRR14782593 | Sensitive | lineage2.2.1 | None | SRR14782468 | Sensitive | lineage4.1.2 | None | SRR14782405 | HR-TB | None | SRR14782472 | Sensitive | lineage2.2.1 | None | SRR14801862 | Sensitive | lineage4.8 | None | SRR14801749 | Sensitive | None | SRR14802245 | Sensitive | lineage4.8 | None | SRR16157105 | Pre-XDR-TB | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR1791747 | Other | La1.8.1 | None | SRR18714931 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715011 | Sensitive | lineage4.1.2.1 | None | ERR176779 | HR-TB | None | SRR18715063 | MDR-TB | lineage2.2.1 | None | SRR18715311 | Sensitive | lineage4.8 | None | ERR11050783 | HR-TB | lineage4.1.2.1 | None | ERR176778 | HR-TB | None | SRR20970016 | Other | lineage2.2 | None | ERR11082855 | Sensitive | lineage4.2.2.2 | None | SRR23938614 | MDR-TB | lineage2.2.1 | None | SRR3675270 | HR-TB | None | SRR3105782 | MDR-TB | lineage3 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675229 | Other | lineage4 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675279 | Other | None | ERR176651 | HR-TB | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675456 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675555 | HR-TB | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | SRR4033215 | Sensitive | lineage4.8.1 | None | ERR212125 | HR-TB | lineage4 | None | ERR212138 | HR-TB | lineage4 | None | SRR4033308 | Sensitive | lineage2.2.1 | None | SRR4033862 | Other | lineage2.2.1 | None | SRR4035900 | Sensitive | lineage4.3.2.1 | None | SRR4033427 | Sensitive | lineage4.3.2.1 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR4035913 | Other | lineage4.3.2.1 | None | ERR11067201 | Sensitive | lineage3 | None | SRR4035916 | Sensitive | lineage4.3.2.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR4037698 | Sensitive | lineage4.4.1.1 | None | SRR4037717 | Sensitive | lineage4.4.1.1 | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR1035138 | MDR-TB | None | ERR6359082 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | SRR6045892 | Sensitive | None | ERR2693227 | Other | lineage4.9 | None | SRR5535933 | HR-TB | None | SRR6046245 | Other | lineage4.9 | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6046225 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | ERR11049759 | Sensitive | lineage4.8 | None | SRR6511621 | HR-TB | None | SRR6046492 | Other | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831117 | HR-TB | None | SRR8217918 | HR-TB | None |
---|