lineage | Count |
---|---|
La3;lineage4.9 | 2 |
lineage4.9 | 12 |
lineage4.6.3;lineage4.9 | 1 |
La1.7;lineage4.9 | 2 |
La1;lineage4.9 | 1 |
lineage2.2.1.2;lineage7 | 1 |
lineage2.1;lineage4.9 | 2 |
La3;lineage4.3.4 | 1 |
lineage4.9;lineage6.3 | 2 |
lineage4.3.2 | 2 |
lineage2.2 | 1 |
La1.2.BCG | 1 |
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
lineage2.2.1 | 3 |
La1.7.X-unk4;lineage4.9 | 1 |
La1.2;La1.8.1 | 1 |
lineage4.9;lineage9 | 1 |
lineage4.9;lineage7 | 3 |
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
lineage4.1.2.1 | 1 |
lineage2.1;lineage4.9;lineage7 | 1 |
M.canetti;lineage4.9;lineage9 | 1 |
lineage4 | 1 |
lineage4.8 | 1 |
spoligotype | Count |
---|---|
None | 44 |
ID | Drug resistance | Lineage | Country iso2 | ERR176643 | Other | La3;lineage4.9 | None | ERR176751 | Other | lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR29231479 | RR-TB | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | SRR3675280 | RR-TB | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR26112672 | Sensitive | lineage4.3.2 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR4769450 | Other | lineage4.9 | None | ERR161037 | Other | lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR3283021 | HR-TB | lineage4.9 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR387051 | Other | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR6045053 | Other | lineage4 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR28859759 | Sensitive | lineage4.3.2 | None | ERR4799025 | Other | lineage4.8 | None | SRR5341330 | Other | lineage4.9 | None |
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