lineage | Count |
---|---|
44 | |
lineage4.9.1 | 1 |
lineage4 | 8 |
lineage3.1.2 | 1 |
lineage4.8 | 2 |
lineage4.5 | 1 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
lineage4.9 | 5 |
lineage4.9;lineage4.6.3 | 1 |
lineage3 | 1 |
lineage4.3.4.2.1 | 1 |
lineage2.1 | 1 |
La2 | 1 |
La1.6 | 2 |
lineage4.4.1.2 | 1 |
lineage4.1.1.3 | 1 |
spoligotype | Count |
---|---|
None | 72 |
ID | Drug resistance | Lineage | Country iso2 | ERR4798406 | HR-TB | None | ERR245758 | Other | lineage4.9.1 | None | ERR6866547 | Sensitive | lineage4 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR736839 | Other | None | ERR752229 | Other | lineage4.5 | None | ERR736848 | HR-TB | None | ERR736865 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987722 | HR-TB | None | SRR1172310 | HR-TB | None | SRR1174897 | HR-TB | None | SRR3675501 | HR-TB | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | ERR158583 | HR-TB | None | SRR17832802 | HR-TB | lineage3 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675488 | HR-TB | None | SRR3675222 | Other | None | SRR5341373 | HR-TB | lineage4 | None | SRR3675312 | HR-TB | lineage4 | None | ERR176740 | HR-TB | None | ERR212001 | HR-TB | None | ERR212123 | Other | None | SRR3675571 | HR-TB | None | SRR3675502 | Other | None | SRR3675550 | Other | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR4816656 | HR-TB | None | ERR4818929 | HR-TB | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR1035138 | MDR-TB | None | SRR5341418 | Other | None | SRR6045519 | HR-TB | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341470 | HR-TB | None | SRR6045553 | RR-TB | lineage4.9 | None | SRR6046397 | Other | None | SRR6046362 | HR-TB | None | SRR6046460 | HR-TB | None | ERR4830353 | Other | None | ERR502524 | HR-TB | La2 | None | SRR6046482 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046824 | HR-TB | None | ERR294266 | HR-TB | None | ERR323039 | HR-TB | None | ERR502889 | Other | None | ERR11268038 | Other | La1.6 | None | SRR8217918 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323045 | HR-TB | None | ERR323053 | HR-TB | None | ERR1034634 | HR-TB | None | ERR11268039 | Other | La1.6 | None | ERR067681 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR1034652 | Other | None | ERR11466044 | Other | lineage4.1.1.3 | None | ERR3439432 | Other | None | ERR3445501 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR133986 | HR-TB | None | ERR3283055 | HR-TB | None | ERR4188247 | HR-TB | None | ERR3797046 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR3797081 | Sensitive | lineage4 | None |
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