lineage | Count |
---|---|
lineage4.1 | 1 |
lineage4.9 | 20 |
lineage4 | 20 |
lineage4.3.3 | 1 |
43 | |
lineage2.2.1 | 6 |
lineage4.7 | 1 |
lineage4.4.2 | 1 |
lineage4.4.1.2 | 1 |
lineage2.2 | 5 |
lineage4;lineage3.1 | 1 |
La1.2 | 1 |
lineage4.3.4.2 | 1 |
lineage4.3.4 | 1 |
lineage4.5 | 1 |
lineage2.2.1.2 | 1 |
lineage7;lineage2.2.1.2 | 1 |
lineage4.8 | 1 |
spoligotype | Count |
---|---|
None | 107 |
ID | Drug resistance | Lineage | Country iso2 | ERR2446566 | Other | lineage4.1 | None | ERR4819933 | Other | lineage4.9 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4818929 | HR-TB | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341456 | Other | None | SRR5341432 | HR-TB | lineage4 | None | ERR2660539 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | SRR5341313 | HR-TB | None | ERR6359082 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5535933 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6046046 | Other | None | ERR2693227 | Other | lineage4.9 | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6046492 | Other | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR4831117 | HR-TB | None | ERR323045 | HR-TB | None | SRR7496523 | Other | lineage4.7 | None | SRR8217918 | HR-TB | None | SRR7496471 | Sensitive | None | ERR1023525 | HR-TB | lineage4 | None | DRR188519 | Other | lineage4.4.2 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR1063857 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063858 | HR-TB | None | ERR1063862 | HR-TB | None | ERR3283025 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3445504 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797046 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR405209 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4769452 | HR-TB | None | ERR4188247 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4799025 | Pre-XDR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4769521 | HR-TB | None | ERR4798431 | HR-TB | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6358991 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811493 | HR-TB | None | ERR6865502 | Sensitive | lineage4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736875 | HR-TB | lineage4 | None | ERR752229 | Other | lineage4.5 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR3675488 | HR-TB | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR26399255 | Sensitive | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR26399239 | Sensitive | lineage4.9 | None | ERR176779 | HR-TB | None | ERR4815471 | Other | lineage4.9 | None | SRR3675501 | HR-TB | None | SRR3675270 | HR-TB | None | SRR3675222 | Other | None | ERR181824 | HR-TB | lineage4 | None | ERR4816656 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR4816964 | Other | lineage4.9 | None | ERR212121 | HR-TB | None | ERR2229198 | MDR-TB | lineage4.8 | None | SRR3675510 | Other | None | ERR212034 | HR-TB | None |
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