Rv0006 - c.1509A>T
Drug resistance types
12 Sensitive
3 RR-TB
15 HR-TB
3 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
23 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 22 |
| La1;lineage2;lineage4.9 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| La1;lineage4.9 | 2 |
| lineage4.4.1.2 | 1 |
| lineage2.2.1 | 4 |
| La1.2 | 1 |
| 3 | |
| lineage3 | 2 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.1;lineage4.8 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.5 | 1 |
| lineage4.1.2 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.3.2.1 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage4.8 | 1 |
| lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage4 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage2.2 | 1 |
| La3;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 57 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4769450 | Other | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR23961549 | Other | La1.2 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR9786843 | Other | None | ERR212001 | HR-TB | None | ERR2510615 | RR-TB | lineage3 | pk | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | SRR6046878 | Other | lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | ERR752229 | Other | lineage4.5 | None | ERR1063896 | Sensitive | None | ERR502511 | Sensitive | lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR6046046 | Other | lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR502510 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR990545 | Other | lineage3 | None | SRR23961542 | Other | La1;lineage4.9 | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR5341453 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR11252664 | Other | lineage2.2.1 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR1183049 | RR-TB | lineage2.2 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None |
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