lineage | Count |
---|---|
lineage4.9 | 7 |
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
lineage2.2 | 1 |
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
M.canetti;lineage2.1;lineage6.3 | 1 |
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
La1.2.BCG | 1 |
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
lineage2.2.1.2;lineage7 | 1 |
lineage4.5 | 1 |
lineage4.1.2 | 1 |
lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
spoligotype | Count |
---|---|
None | 21 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR29096203 | Sensitive | lineage4.9 | None |
ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
ERR4810624 | MDR-TB | lineage2.2 | None |
ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None |
ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None |
SRR29096107 | Sensitive | lineage4.9 | None |
SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None |
ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None |
ERR4798262 | HR-TB | La1.2.BCG | None |
SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None |
ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None |
SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None |
ERR752229 | Other | lineage4.5 | None |
SRR9970980 | HR-TB | lineage4.1.2 | None |
SRR29096276 | Sensitive | lineage4.9 | None |
SRR29096425 | Sensitive | lineage4.9 | None |
SRR10809074 | Sensitive | lineage4.9 | None |
SRR3675464 | HR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None |
SRR12416842 | HR-TB | lineage4.9 | None |
ERR3797046 | HR-TB | lineage4.9 | None |