Rv1484 - c.453G>C
Drug resistance types
13 Sensitive
5 RR-TB
91 HR-TB
8 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
55 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 13 |
| lineage4 | 8 |
| 76 | |
| La3 | 1 |
| lineage4.9 | 27 |
| lineage4.4.1.1 | 1 |
| lineage2.2.1 | 6 |
| lineage1.2.1.2 | 1 |
| lineage4.5 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage3 | 2 |
| La1.8.1 | 4 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage3;lineage2.1 | 1 |
| lineage4.3 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.1.1 | 1 |
| lineage1.1 | 1 |
| lineage2.2 | 5 |
| lineage4.3.3 | 3 |
| lineage3.1 | 2 |
| La1.6 | 2 |
| lineage4.4.1.2 | 1 |
| La1 | 1 |
| lineage4;lineage3.1 | 1 |
| La1.2 | 1 |
| lineage4.9.1 | 1 |
| lineage4.8 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage2.2.2 | 2 |
| lineage2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 175 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1169306 | Other | None | SRR1169249 | Other | La3 | None | SRR13861163 | Sensitive | lineage4.9 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR13423544 | Other | lineage4.5 | None | SRR13861322 | Other | lineage4.9 | None | SRR13861180 | Other | lineage4.9 | None | SRR13861261 | Sensitive | lineage4.9 | None | SRR13861434 | RR-TB | lineage4.9 | None | SRR13861381 | MDR-TB | lineage4.9 | None | SRR13861396 | HR-TB | lineage4.9 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR13861489 | Sensitive | lineage4.9 | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR13861510 | Other | lineage4.9 | None | SRR13861528 | HR-TB | lineage4.9 | None | SRR13861629 | RR-TB | lineage4.9 | None | SRR13861564 | Sensitive | lineage4.9 | None | SRR13861660 | Sensitive | lineage4.9 | None | SRR13861666 | Sensitive | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR13861699 | Sensitive | lineage4.9 | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR17658565 | Other | lineage3 | None | SRR1791696 | Other | La1.8.1 | None | SRR6325445 | HR-TB | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675486 | HR-TB | None | SRR3675482 | HR-TB | None | SRR3675488 | HR-TB | None | ERR1035239 | HR-TB | None | ERR161033 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675222 | Other | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR176643 | HR-TB | None | SRR3675234 | Other | None | SRR3675501 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675383 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR176751 | HR-TB | None | ERR4816656 | HR-TB | None | SRR3675510 | Other | None | SRR3675545 | HR-TB | None | SRR3675558 | HR-TB | None | ERR212001 | HR-TB | None | ERR212033 | HR-TB | None | ERR4816466 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR3275215 | Other | lineage4.1.2.1 | nl | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR4818929 | HR-TB | None | ERR1035138 | MDR-TB | None | ERR4821053 | Other | lineage3 | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR2693231 | Other | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR2693239 | HR-TB | None | ERR2693257 | Other | None | ERR2693230 | Other | None | ERR278594 | HR-TB | None | ERR2693254 | Other | None | SRR6045555 | HR-TB | None | ERR2446118 | Other | lineage4.1.2.1 | nl | SRR6044875 | HR-TB | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6044890 | Other | lineage4.9 | None | SRR6046362 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6325442 | HR-TB | None | ERR2693232 | Other | lineage4.9 | None | SRR6325444 | HR-TB | None | SRR6325447 | HR-TB | None | ERR4830353 | Other | None | SRR6046460 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR294248 | HR-TB | None | SRR6831950 | Other | lineage4.3.3 | None | ERR5311090 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR5311081 | HR-TB | None | ERR323036 | HR-TB | None | ERR5311099 | HR-TB | None | ERR11268038 | Other | La1.6 | None | ERR323041 | HR-TB | None | ERR323038 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323063 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR11268039 | Other | La1.6 | None | ERR3283032 | HR-TB | None | ERR1034634 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3283017 | HR-TB | None | ERR3283025 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR3283021 | HR-TB | None | ERR3283024 | Other | None | ERR3283055 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR4821179 | Other | lineage4.1.2.1 | gb | ERR3797014 | Other | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797010 | Sensitive | lineage4.9 | None | ERR3797024 | Other | lineage4.9 | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797017 | Other | None | ERR3797060 | Other | La1.8.1 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797046 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797044 | Other | None | ERR3797083 | HR-TB | None | ERR3797061 | Other | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797082 | Other | lineage4.9 | None | ERR3797081 | Sensitive | lineage4 | None | ERR6358837 | HR-TB | None | ERR387051 | HR-TB | None | ERR405209 | Sensitive | lineage4 | None | ERR4188247 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR3797086 | Other | lineage4.9 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4769521 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR5908228 | Other | lineage4.3.3 | None | ERR6198317 | Other | La1.2 | None | ERR245758 | Other | lineage4.9.1 | None | ERR6866807 | HR-TB | lineage4 | None | ERR6359045 | HR-TB | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR752229 | Other | lineage4.5 | None | ERR8976043 | HR-TB | None | ERR9119096 | Other | lineage4.3.3 | None | ERR9119669 | HR-TB | None | ERR736839 | Other | None | ERR736848 | HR-TB | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR069981 | HR-TB | lineage2.2.2 | None | SRR069989 | HR-TB | lineage2 | None |
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