Rv0006 - c.-458T>C


Drug resistance types
16 Sensitive 8 RR-TB 70 HR-TB 28 MDR-TB 6 Pre-XDR-TB 2 XDR-TB 125 Other
lineage Counts
lineage Count
lineage4.9 71
lineage4.1.1.3 1
lineage2.1;lineage4.9;lineage6.3 9
M.canetti;lineage4.2 1
lineage4.1.2.1 7
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.3.4.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
15
lineage4.9;lineage6.3 5
lineage4.6.3;lineage4.9 2
La3;lineage4.9 7
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage4.5 1
La3;lineage2.1;lineage6.3 1
lineage2.2.1 5
lineage2.2 2
La3;lineage2.1;lineage4.9 3
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage6.3.1 1
lineage2.1;lineage4.9 16
La1.6;La3;M.canetti;lineage4.2.2 1
M.canetti;lineage2.1;lineage4.9 2
lineage4.8 4
lineage2.1;lineage6.3 2
La1.7.1 1
lineage2.1 3
lineage4 3
lineage4.3.3 3
La1.7;lineage4.9;lineage7 3
La2;lineage4.9 1
lineage2.2.1;lineage4 1
lineage1;lineage4.9 1
M.canetti;lineage1 1
lineage4.1.1.1 1
La1.7;lineage4.9 4
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La1;lineage4.9 1
lineage4.1.3 2
lineage4.9;lineage7 4
lineage4.8.1 1
lineage4.1.2 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.9;lineage9 1
lineage4.2;lineage4.8.1;lineage4.9 2
lineage4.3.4.2.1 4
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage2.2.1;lineage4.9 1
M.canetti;lineage2.2 2
lineage4.6.2.2 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.2;lineage4.9 2
lineage1.1.3.1 1
La1.2.BCG 1
lineage3 3
lineage2.1;lineage4.9;lineage7 1
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La2;lineage2.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.9 1
lineage4.9;lineage6.1.3 1
lineage3.1 1
La3;lineage4.3.4 1
La1.7.1;La1.7.X-unk4 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
La3;lineage2 1
La3 1
lineage6.1.3 1
lineage1.2.1.2.1 1
M.canetti;lineage4.9;lineage9 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.8 2
lineage4.4.1.1.1 1
La1.7.X-unk4;lineage4.9 1
lineage2.2.1.1 1
lineage4.7 2
La3;lineage1.1.2 1
La1.2.BCG;La1.8.1 1
lineage4.6.1.1 1
lineage2.2.1;lineage6.3 1
La1.7;lineage3.1;lineage4 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage1.2.2.2 1
spoligotype Counts
spoligotype Count
None 255
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4769450 Other lineage4.9 None
ERR11465024 Other lineage4.1.1.3 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4817915 Other lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR4819422 HR-TB lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786682 Other lineage4.1.2.1 None
ERR161037 HR-TB lineage4.9 None
ERR11465279 Sensitive lineage4.3.4.1 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675572 Other None
ERR9786671 Other None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR11252612 Other La3;lineage4.9 None
ERR4796577 HR-TB None
ERR234659 HR-TB None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR9787197 Other None
SRR3675236 Other None
SRR28119805 Other lineage4.9 None
ERR752229 Other lineage4.5 None
ERR1035157 Other lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR5341373 Other lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4810624 MDR-TB lineage2.2 None
SRR5341330 Other lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR9787139 Other lineage6.3.1 None
SRR6046046 Other lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR4817735 Other lineage4.8 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR1792478 HR-TB La1.7.1 None
ERR4820773 HR-TB lineage4.9 None
ERR702406 Other lineage2.1 None
SRR1167384 Other La3;lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR3283044 Other lineage4 None
SRR5153091 HR-TB lineage4.3.3 None
ERR2229084 Sensitive lineage4.8 dk
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR323115 Sensitive lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR181887 Other lineage4.9 None
ERR2027263 Other lineage4 None
ERR4769521 RR-TB lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR176643 Other La3;lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR15014655 Other M.canetti;lineage1 None
ERR4815441 HR-TB lineage4.9 None
ERR485006 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR3675221 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR323037 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR21732980 Other lineage4.3.3 None
ERR176751 HR-TB lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
ERR11465232 Sensitive lineage4.1.2.1 None
ERR3804155 Other lineage4.1.2.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR133825 HR-TB La1;lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR14782405 HR-TB lineage4.9 None
ERR473332 Other lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR4818347 Other lineage4.1.2 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
SRR1196546 Other lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR4769452 Other lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR11465511 Other lineage4.3.4.2.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR9786601 Other lineage4.1.2.1 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR9786645 Other lineage4.6.2.2 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR11662690 HR-TB lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
ERR181824 MDR-TB lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
ERR9786604 Other None
ERR4815604 Other None
SRR6789626 Other None
ERR11252736 Other lineage4.9 None
SRR18213713 HR-TB None
ERR212001 HR-TB None
ERR4816999 Other None
SRR1196583 Other lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR4800341 HR-TB lineage3 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6046385 Sensitive lineage4.9 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR26399973 Other La3;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR387051 RR-TB lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4817434 Other lineage3 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6789621 Other lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
SRR1173400 Other lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR1063849 HR-TB lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR4799513 HR-TB lineage2.2 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR181744 HR-TB La3;lineage4.9 None
ERR323107 HR-TB lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR1063858 HR-TB lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR736831 Other lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
ERR3797046 HR-TB lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1172817 Other La3 None
ERR9787165 Other lineage6.1.3 None
SRR3675311 Other lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR4811493 HR-TB lineage4.9 None
ERR9657183 Sensitive lineage1.2.1.2.1 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR6045053 Other lineage4 None
SRR7496509 Other None
SRR7535086 Other None
ERR6866807 RR-TB lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR3675275 Other lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR6046878 Other lineage4.9 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR4819932 Other lineage4.7 None
ERR3283055 HR-TB lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR9786569 Other lineage4.8 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR11465628 Sensitive lineage4.3.4.2.1 None
ERR4799025 Other lineage4.8 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR6358755 Other lineage4.6.1.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
SRR1175487 Sensitive lineage4.9 None
ERR4814672 Sensitive lineage3 None
ERR11081266 Sensitive lineage4.7 None
ERR1063855 Other lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR3804169 HR-TB lineage4.1.3 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR6046382 RR-TB lineage2.2.1 None
SRR7496472 Other lineage4.9 None
SRR6046210 Other lineage4.9 None
ERR3797070 Other lineage4.9 None
ERR176779 HR-TB lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4769474 HR-TB lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
SRR1165699 Other lineage4.9 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
ERR3797081 Sensitive lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4769444 HR-TB lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR4819781 Other lineage2.2.1 None
ERR3797047 MDR-TB lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR12015083 Other La3;lineage4.8 None
SRR1165628 Other La3;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
ERR4797054 Pre-XDR-TB lineage2.1 None