Rv1173 - c.1623C>T


Drug resistance types
11 Sensitive 2 RR-TB 71 HR-TB 12 MDR-TB 5 Pre-XDR-TB 0 XDR-TB 66 Other
lineage Counts
lineage Count
lineage4.3.3 3
95
lineage3.1 2
lineage2.2.1 6
lineage2 3
lineage4.2.1 2
lineage2.1 2
lineage2.2.1;La3 1
lineage4.5 2
lineage4.9 8
lineage4.8 8
lineage3;lineage2.2.1 1
lineage4.9;La3 1
lineage6.3;lineage2.2.1 1
lineage4.1.1 1
lineage4.3.4 1
lineage4 9
lineage4.4.1.1 1
lineage2.2 1
La1.8.1 3
lineage4.8;La3 1
lineage1.1.2 2
lineage4.1.2 1
lineage4.1.2.1 3
lineage4.7 1
lineage3;La3 1
La1 1
lineage3 1
lineage4.6.1.1 1
lineage6 1
lineage4.3.2 1
lineage4.3.4.2.1 1
lineage6.3.1 1
spoligotype Counts
spoligotype Count
None 167
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR1184294 HR-TB None
SRR1184346 HR-TB lineage3.1 None
SRR1184312 HR-TB lineage2.2.1 None
SRR1196474 HR-TB lineage3.1 None
SRR1184380 HR-TB None
SRR1184388 Other None
SRR1184372 MDR-TB None
SRR1184381 MDR-TB None
SRR1196494 MDR-TB None
SRR1196546 HR-TB None
SRR1196677 HR-TB lineage2 None
SRR1196566 HR-TB None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR12416824 HR-TB None
SRR1196768 MDR-TB None
SRR12142341 HR-TB None
SRR1710057 Other lineage2.1 None
SRR15368973 Other None
SRR26937071 MDR-TB lineage2.2.1;La3 None
SRR18213713 HR-TB lineage4.5 None
SRR19295647 Sensitive lineage4.9 None
SRR19303884 HR-TB None
SRR20969677 HR-TB lineage2 None
SRR25827682 Other None
SRR19304036 HR-TB None
ERR11081257 Other lineage4.8 None
ERR4815604 HR-TB None
SRR25827497 Pre-XDR-TB lineage3;lineage2.2.1 None
SRR26399973 Other lineage4.9;La3 None
SRR28119811 Other lineage6.3;lineage2.2.1 None
ERR176793 Other lineage4.1.1 None
SRR3675465 HR-TB None
ERR4814352 HR-TB lineage2.2.1 None
ERR161039 Sensitive lineage4.3.4 None
ERR2229542 Other lineage4.8 None
SRR3416776 Other lineage2.1 None
SRR3675221 HR-TB None
ERR181744 HR-TB None
SRR3675236 HR-TB None
SRR3675311 Other None
ERR4816999 Other None
ERR4817037 Other lineage4.9 None
ERR2027263 Other lineage4 None
ERR4817060 RR-TB None
ERR212034 HR-TB None
ERR212123 Other None
SRR3675572 Other None
ERR212138 HR-TB lineage4 None
SRR3675574 HR-TB None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR4816585 Other lineage2.2 None
SRR3742665 HR-TB None
ERR4818021 Other La1.8.1 None
ERR502912 Other lineage2.2.1 None
ERR4817735 Other lineage4.8 None
ERR4817893 Other lineage4.8;La3 None
ERR3275201 Sensitive lineage4.8 nl
ERR245675 Sensitive lineage1.1.2 None
ERR234659 HR-TB None
ERR4818347 Other lineage4.1.2 None
SRR5341302 HR-TB None
ERR2514327 HR-TB lineage4.8 None
ERR4819781 Other lineage2.2.1 None
ERR2514692 Other None
ERR4820854 Other lineage4.1.2.1 None
SRR5341333 HR-TB None
ERR2514821 Other lineage2.2.1 None
ERR4819932 Other lineage4.7 None
ERR2446570 Sensitive lineage4.8 nl
ERR2693238 HR-TB lineage4.9 None
ERR2693257 Other None
ERR2693230 Other None
SRR6045503 HR-TB None
ERR2693254 Other None
SRR6046210 Other lineage4 None
ERR2693227 Other lineage4.9 None
SRR6045526 HR-TB None
SRR6045555 HR-TB None
SRR6046133 HR-TB None
SRR6044876 Sensitive lineage4 None
SRR6044790 HR-TB None
SRR6789626 Other None
SRR6046540 HR-TB None
SRR6785262 Sensitive lineage4.2.1 None
SRR6046066 HR-TB None
SRR6045327 HR-TB None
SRR6046305 Other lineage4.9 None
SRR6046397 Other None
SRR6458423 HR-TB lineage2.2.1 None
ERR294266 HR-TB None
SRR7535086 Other None
ERR502532 HR-TB None
SRR7131023 Other lineage4.1.2.1 None
SRR7496517 Other None
ERR323043 HR-TB None
ERR1063858 HR-TB None
ERR1035157 Other lineage4.9 None
ERR1023302 MDR-TB lineage3;La3 None
ERR3283036 HR-TB None
ERR11049020 Other lineage4.8 None
ERR3283030 HR-TB lineage4.9 None
ERR3283027 HR-TB None
ERR3283014 HR-TB None
ERR3283028 Other None
ERR3283047 HR-TB None
ERR3797015 HR-TB None
ERR3283057 HR-TB lineage4 None
ERR3283055 HR-TB None
ERR3797063 HR-TB None
ERR3797046 HR-TB None
ERR3797036 HR-TB None
ERR3797060 Other La1.8.1 None
ERR3797069 Other None
ERR3797014 Other None
ERR3797064 Sensitive None
ERR3797079 Sensitive lineage4 None
ERR3797073 HR-TB La1.8.1 None
ERR3797081 Sensitive lineage4 None
ERR4798262 HR-TB La1 None
ERR4188247 HR-TB None
ERR4407463 HR-TB None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4810741 HR-TB None
ERR4800341 Other lineage3 None
ERR5336148 Other None
ERR4811022 HR-TB None
ERR4811142 MDR-TB None
ERR4811105 HR-TB None
ERR6358755 Other lineage4.6.1.1 None
ERR702404 HR-TB None
ERR702406 HR-TB None
ERR9787165 Other lineage6 None
ERR9117709 HR-TB None
ERR9117805 Other lineage4.3.2 None
ERR9634265 Sensitive None
ERR9786682 Other lineage4.1.2.1 None
ERR736848 HR-TB None
ERR736867 HR-TB None
ERR736874 HR-TB None
ERR752229 Other lineage4.5 None
ERR176549 Other lineage4.3.4.2.1 None
ERR9117721 HR-TB lineage1.1.2 None
ERR9786569 Other lineage4.8 None
ERR9786604 Other None
SRR1172951 Other None
ERR9787139 Other lineage6.3.1 None
ERR9787197 Other None
SRR1172817 HR-TB None
SRR1172857 MDR-TB None
SRR1169194 Other None
SRR1172234 Other None
SRR1172728 MDR-TB None
SRR1173363 HR-TB None
SRR1173118 Other None
SRR1173153 HR-TB None
SRR1173218 Pre-XDR-TB lineage4.3.3 None
SRR1173384 Other lineage4 None
SRR1173629 Other None
SRR1173400 Other None
SRR1173562 HR-TB lineage4 None
SRR1173778 Other None
SRR1173706 Other lineage4.9 None
SRR1175074 MDR-TB None
SRR1175049 RR-TB None
SRR1173788 Other None